Salvelinus namaycush (lake trout): 120061597
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Entry
120061597 CDS
T07522
Name
(RefSeq) biglycan-like
KO
K08118
biglycan
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120061597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
snh00535
]
120061597
Proteoglycans [BR:
snh00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class I
120061597
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRRNT
LRR_9
LRR_5
LRR_14
Motif
Other DBs
NCBI-GeneID:
120061597
NCBI-ProteinID:
XP_038867434
UniProt:
A0A8U1GZM4
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Position
Sna16:complement(26432050..26436207)
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AA seq
372 aa
AA seq
DB search
MLPFSVVLLLLCATPLPTASVALPFEQKGLLDFGKSIDVEGLMMMMMNDEEEGSAVEEYS
KPEQPTCPFGCQCNQNVVQCSDLGLHYVPYDIPPETRLLDLQSNQITEIRENDFKGLSNL
YALVLVNNKISRVHPRAFMPLKRMHKLYFSHNQLTAVPKNLPSSLVELRIHDNHIKRVAS
GAFSGLRSMNCIEMGRNPIQNSGFEPGAFDGLKLTFLRISEAKLTGIPKDLPEGLHELHL
DHNQIQAIELEDLRQYESLHRLGLGYNHIHHIEHGSLYYLQNLRELHLENNRIPNVPGGL
AGMKYLQVVYLHSNNISQVDVNDFCPNGFGVKKTYYNGISLFDNPINYWEVVPATFRCVS
NRMAVQFGNHKK
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgcttcccttctctgttgtccttctcctgctgtgtgccacccctcttcccaccgcctct
gtggccctgccctttgagcagaagggcttattggactttgggaagagcatcgatgtagag
gggctgatgatgatgatgatgaacgatgaagaggaaggctcagcggttgaggaatactct
aaaccagaacagcctacttgcccattcggctgtcagtgtaaccagaatgttgtgcagtgc
tctgacttgggtttacactatgtgccatatgacatccccccggagaccaggctcctggac
cttcaaagcaaccagatcactgagataagagagaatgacttcaagggactcagtaacctc
tatgctctggtgttggtgaataacaaaatctccagggtgcaccctcgggccttcatgccc
ctcaaaaggatgcacaagctctacttctcccacaaccagctgacggccgtgcccaagaac
ctgccctcttccctggtggagctgcgcatccacgacaaccatatcaagcgggtggcatct
ggggctttctctggcctgcgcagcatgaactgcattgagatggggaggaatcctattcag
aacagtggttttgagcccggagcctttgatggacttaaacttaccttccttcgcatttct
gaggcaaaactcacaggcatccctaaagatctccctgagggtctacatgagttgcatttg
gatcacaatcaaattcaagccattgaactagaagacctaagacaatatgagagtttgcac
aggttgggtctaggctacaatcacattcatcacattgagcatggcagcctgtactacctg
caaaacctgagagagctgcatctagagaacaaccggatccccaatgtccctggaggcctt
gctggaatgaagtacctgcaggtagtctaccttcactccaacaacatcagccaggttgac
gtgaatgacttctgccctaacggctttggtgtcaagaagacttactacaacgggatcagt
ctctttgataacccaatcaactactgggaggtggtgccggccaccttccgctgtgtcagc
aacaggatggctgtacagtttggcaaccacaaaaagtag
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