Salvelinus namaycush (lake trout): 120061606
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Entry
120061606 CDS
T07522
Name
(RefSeq) class E basic helix-loop-helix protein 40-like
KO
K03729
class B basic helix-loop-helix protein 2
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120061606
Transcription factors [BR:
snh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
120061606
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Gene cluster
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
YabA
DUF5365
ApbA
Motif
Other DBs
NCBI-GeneID:
120061606
NCBI-ProteinID:
XP_038867443
UniProt:
A0A8U1F0G5
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Position
2:complement(33108366..33112395)
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AA seq
425 aa
AA seq
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MEMERIPSAQPTPKHQQAELSDMQGMDFPMYVYKSRRGMKRGDDSKETYKLPHRLIEKKR
RDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHVKALTTLLENQQQKILSLQNG
MQIEQSSPSQENSEEIFRSGFHVCAKEVLQYLVNQEGHGDLTPSHMVNHLHKVAAEVLQG
PPRSPCKPRPEETTSHYQHHQAHREKPAGQPPKPSEGHGKNCVPVIQRRYAHAGGEQSGS
DTDTDSGYGGEQVEHLASHAGYYGQERQLKRALGEKRASFCIKQEDEACHKRSRVESSED
ESLSGGESSSSSSSGHGSYMSAYSPHQAQPHPLCMPFYLIPPSAAAYLPMLEKCWYSGAM
PMIYPGLVGSAQGMPSDRHVPSPSIMMSPRGRSPSPPTVAQSPMDSPAFLQVLKQVLPMN
LETKD
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggaaatggaaaggattccaagtgcgcaacccacccccaagcaccagcaggctgagctg
tctgacatgcaagggatggatttccctatgtatgtatacaaatcccgtcggggaatgaaa
cgaggagatgatagcaaggaaacctacaaactgcctcaccgactaatcgagaagaaaagg
cgtgacaggataaacgagtgcatcgctcagttgaaagatttattgcccgagcacctgaaa
cttacaactcttggccatctggagaaggctgtggttttggagctcacgcttaagcatgtg
aaagctctaaccactctactggaaaaccagcagcagaaaatcctcagtctgcagaatggc
atgcaaatcgagcagtcctctcccagccaggagaacagtgaggagatcttccgctcaggc
ttccatgtctgtgccaaggaggtgctgcagtacctggtcaaccaggagggtcacggtgac
cttacaccctcccacatggtcaaccacctgcacaaggtggccgctgaggtcctccagggt
cctccccgtagcccctgcaaaccccggcctgaagagaccaccagccactaccaacatcat
caggcccacagggagaagcctgcaggccagccccccaagcccagtgaagggcatgggaag
aactgcgttcccgtcatccagcggaggtatgcccatgcgggcggcgagcagagcggcagc
gatacagacacagacagcggctatggtggcgagcaggttgagcatctggcgtcgcatgca
gggtactacggccaggagagacagctgaagagggcgctgggcgaaaagagggcatcattt
tgcattaagcaggaagatgaggcgtgccacaaacgcagccgggtcgagtcatccgaggac
gagtctctctcaggcggagagtcgtcctcatcctcctccagcggccacggcagctacatg
agcgcctactcccctcaccaggcccaacctcatcccctctgcatgcccttctacctcatc
cccccctctgccgctgcctatctgcccatgctggagaagtgctggtactcaggggccatg
cccatgatttaccctggcctggtgggctctgcgcagggcatgcctagtgacaggcatgtc
ccctctccctcgatcatgatgtcccccagggggcgctctccctctccccccaccgtagcc
caaagccccatggactccccagccttcctccaagtgttaaagcaggtacttcccatgaac
ctggaaaccaaagactga
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