Salvelinus namaycush (lake trout): 120061690
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Entry
120061690 CDS
T07522
Name
(RefSeq) host cell factor 1-like
KO
K14966
host cell factor 1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03083
Polycomb repressive complex
snh04980
Cobalamin transport and metabolism
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120061690
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
120061690
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120061690
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120061690
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120061690
03029 Mitochondrial biogenesis [BR:
snh03029
]
120061690
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120061690
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
120061690
HMT complexes
COMPASS/SET1 complex
120061690
MLL-HCF complex
120061690
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
120061690
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
120061690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_5
Kelch_3
Kelch_4
Kelch_1
Kelch_6
Kelch_2
Motif
Other DBs
NCBI-GeneID:
120061690
NCBI-ProteinID:
XP_038867512
UniProt:
A0A8U1H303
LinkDB
All DBs
Position
Sna16:complement(42706795..42758335)
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AA seq
834 aa
AA seq
DB search
MASGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHVYNTATNQ
WFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWKRLKAKSP
KNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRAGSSVVGWD
IPITYGVLPPPRESHTAVVYTEKSRLVIYGGMSGCRLGDLWILDIDTLTWNKPSINGTAP
LPRSLHSATTITNKMYVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNLDSMVWESVLLD
SLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLETEKPRPPSRVQL
VRANTSSLEVSWGAVPTADTYLLQLQKYDIPPASAATSPGVSPATSLPVNSSPKSPVTAS
AVSVQGHPLQGLTLVPSMPGSPVPARGPAILKVSAPHSTTGTSIVTVRQANQGGKSPVMV
TSLPAGVRMVVPAQVAQGTPMGSSPQMSGMAALAAAAAATQKIPPSTATMQLPAGATIVK
TVAMSPGAQTVKVASPVMISNPATRMLKTAAAQVGTSGVATPGTPNRPIITVHKSGTVTV
AQQHQVVTTVVGGVTKTITLVKSPLTLGGGGTLLTAANQGQNKVMSGKDVQHWLSNLSNL
GKVMSVVQTKPGQTGAMTGQTGSSLQHILQTKGPLPAGTILKLVTSADGTPTTIITTSKA
GGTVGGKPTILSYSSMPTSTSKPGTHIIPIGKTGSSRTPLWFGGNFAAVSALHSRLAGTR
QSSIPEGVSPFPGERSCSRPNQPAMEVCHSSKKVSSGNGGLHGDVEPRTDTDQK
NT seq
2505 nt
NT seq
+upstream
nt +downstream
nt
atggcatctggctcagttctgcagccacggtggaagcgggttttgggttggtccggtcct
gtccctcggccccgacatgggcaccgtgcggttgcaatcaaagaattgatggtcgttttc
gggggtggcaatgaaggaattgtggatgagttgcacgtttataacacagcgaccaatcag
tggttcattcctgctgtccgtggtgatatcccgcctggctgtgctgcatatggatttgtg
tgtgatggcaccaggctgctggtgtttggagggatggtggagtatggcaaatacagcaac
gatctgtatgaactgcaggccagccgctgggagtggaagcgtctgaaggccaagtctcct
aagaacggcccccctccatgcccccgtctgggccacagcttctccctggtagggaacaaa
tgctacctgttcggaggactggctaacgacagcgaggaccccaagaacaacatccccaga
tacctgaatgatctgtatacgttggagctgcgtgccggctccagtgtggtgggctgggac
atccccatcacctacggggtgttgcccccgcccagagagagccacactgccgtagtctac
acagagaagtcccgtctagtcatctatggaggcatgagtggttgtcgtctgggggatctg
tggatcttagacatagacaccctcacatggaataagccctctatcaacggaacagctcct
ctccctcgcagtctccactctgccacaaccatcaccaacaagatgtacgtgttcggaggc
tgggttcccctggtgatggatgatgtcaaagtagcaacacacgagaaggagtggaagtgc
accaacacactggcctgtctcaacctagactcgatggtgtgggagtcagttctgctggac
tctctagaggataatatccccagggcccgggctggacactgctccgtagccatcaactca
cgtctctacgtctggagtggacgggacggctaccgcaaggcctggaacaaccaggtgtgc
tgtaaggacctctggtacctggagacagagaagccccgccccccgtcacgggtgcagctg
gtgagagccaacaccagtagcctggaggtgagctggggggcggtacctaccgcagacacc
tacctgttgcagctgcagaagtacgatatcccccccgcctcggctgccacttcccccggc
gttagccccgcgacatcactgccggtcaattcttcccccaagagccctgtcaccgcctcg
gcggtgtccgtccagggccaccctctccagggcctcaccctggtcccctccatgcccggg
agtccagtccctgctcgcggaccagctattctgaaggtgtctgctccccattccaccaca
ggcacctccatcgtcacggtgagacaggccaaccagggcgggaaatcccctgtcatggtt
acatcacttcctgctggggtccgaatggtggtgccggcccaggtcgcacagggaacccca
atgggcagcagccctcagatgagtggcatggctgcgctggctgctgcagctgcggccacc
cagaagatcccgccctccacggccaccatgcagcttccagctggtgccaccatagtcaag
acagtggccatgagccctggcgcacagactgtcaaagtagcttcgcctgttatgattagt
aacccagcaacccgcatgctgaagactgctgcggctcaggtgggcacgtcaggtgtcgcc
acacccggaacgcccaatcggccaatcatcaccgtgcacaagtctggcacggtgacggtt
gcccagcaacaccaggtggttaccacggtagtgggaggagtcaccaagaccatcactctg
gttaagagtcccctcactctggggggaggtggcacgttgctgactgcggccaaccagggc
caaaacaaagtgatgtctggcaaggacgtgcagcattggctgtctaacctgtccaacctg
gggaaggtgatgtcagtagtccagaccaaacctggtcagacaggagcgatgacgggacag
actggctccagcctacagcacatcctacagacgaagggtcctctcccggcgggtactatc
ctgaagctggtgacgtcagccgacggtacgcccaccaccatcatcaccacttccaaggcc
gggggcaccgttgggggcaagcccaccatcttgtcctacagcagcatgcccacctccacc
tcaaagccgggcacccacattatacccatcggaaaaacgggttctagccggacgccgctc
tggtttggtggaaatttcgccgccgtgtcggctctccacagccgactggccggtactcgg
cagagttccatccccgaaggggtctcccccttccctggagaacggagctgttctcgaccc
aaccaaccagccatggaggtatgtcactcgtcgaagaaggtgtcctctggcaacgggggt
ctccatggagatgttgagcccagaactgacacagaccagaaatag
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