Salvelinus namaycush (lake trout): 120061698
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Entry
120061698 CDS
T07522
Name
(RefSeq) laminin subunit beta-1-like
KO
K06243
laminin, beta 2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04510
Focal adhesion
snh04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120061698
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120061698
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
Keratin_B2_2
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
120061698
NCBI-ProteinID:
XP_038867519
UniProt:
A0A8U1F0Z5
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Position
Sna16:43921199..43998478
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AA seq
1303 aa
AA seq
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MTLSLLALLPMRAECQSGLRRLGCVNQMGCSLDSCCRLSCCRLSCCRLSCCRLSCCRLSC
CRLSCCRLSCCRLSCCRLSCCRLSCCRLSCCRLSCCRLSCCRLSCCRLSCCRLSCCRLSC
CRLSCCRLSCCRLSCCRLSCCRLSCCRFRLSCCRLSCCRLSCCRLSCCRLSCCRLSCCRL
SCSLAYATAQVPDHAHGCTHGSCYPATGDLLVGREKSLKASSTCGSRKKEPYCIVSHLQD
EKKCFQCDSRRPYDPVYNTISHRIENVITTFKPHRKKSWWQSENGKPDVFIQLDLEAEFH
FTHLIMTFKTFRPAAMVIERSADFGRNWQVYRYFAYDCASVFPGISKGPLRKVDDVTCES
RYSDIEPSTEGEAIYRVLDPAIRIEDPYSPNIQNQLKITNLRVNFTKLHTLGDNLLDSRV
EIKEKYYYAMYELIIRGNCFCYGHASECAPIDGIKDEEGMVHGRCVCKHNTKGLNCELCD
DFHNDVPWRPAEGRNTNACKKCNCNGHSNQCHFDMAVYLATGNASGGVCDDCLHNTMGRT
CEMCKPFYYLNPSRDIRDPGVCSACDCDPDGSLNGGICDGHDEPSLGMVAGRCRCKDHVE
GPRCDKCKSGFFGLSAENPRGCQTCQCDPRGTVSERPQCDPVSGDCFCKRQVTGRSCGQC
LPEHWALSHDLNGCRDCDCDVGGATDNHCSMENGQCRCRSYMVGRQCTQVESGYFFMALD
HYIYEAELAMLGQGCSVEQREHQPGRPTTWTGTGFAKVPEGSSLDFSINIIPYSMEYDLL
IRYESQMPRDLEEVRVTIIRPGPIPTSSPCGNTIPADDMLTVSLPAGSRFVVLPQSICLE
RGVSYTLHFEFSRYLERNNVLIPGTTAANILVDSISLLPRYSSLEMFIGGDPASIARKQS
YERYRCHDGAKSVTRPQISDVCAKLITSMSAIINHGALACQCDPQGSVSSVCDMRGGQCR
CRSNVIGRRCDHCGPGTYGFGPAGCKACECSLEGAVTRFCDQLTGQCPCSQGAFGQRCDG
CQAGHWGFPNCKQCLCNGHAEECHQRTGACLNCRENTGGDKCDRCANGYYGNPVLGTGNS
NRCQPCPCPDGPNSGRYFATSCHQDNRNRQVVCNCNQGYTGSRCEECAPGYYGNPSQPGG
RCQPCRCSNNIDMSDLDACDRRTGECEKCLYNTEGPDCGVCKSGYYGDASRRNCRKCTCN
FLGTEQTQCTARDECVCQRATGQCQCLPNTIGLTCDHCKPNYWNLASGRGCEACGCEPNN
AVNPACNEFTGKCQCRDGFGGKTCTDCQENYWGDPRIQCRGQH
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgacgttgtcgctgctcgcgctgctccctatgcgcgctgagtgccagtccggtttacgc
aggttgggctgtgtcaaccagatgggatgttctcttgatagttgctgtaggttgagctgc
tgtaggttgagctgctgtaggttgagttgctgtaggttgagctgctgtaggttgagttgc
tgtaggttgagctgctgtaggttgagctgctgtaggttgagctgctgtaggttgagctgc
tgtaggttgagttgctgtaggttgagctgctgtaggttgagctgctgtaggttgagctgc
tgtaggttgagctgctgtaggttgagttgctgtaggttgagttgctgtaggttgagctgc
tgtaggttgagctgctgtaggttgagctgctgtaggttgagttgctgtaggttgagttgc
tgtaggttgagttgctgtaggtttaggttgagctgctgtaggttgagttgctgtaggttg
agttgctgtaggttgagttgctgtaggttgagctgctgtaggttgagttgctgtaggttg
agctgctccctagcctatgccaccgcccaggtgcccgaccacgcccacggctgtacccat
ggcagctgttaccccgcaacgggagacctgttggtgggccgtgagaagagcctgaaggcc
tcgtctacctgtggctccaggaagaaagagccttactgtatcgtcagtcatctacaggat
gagaagaaatgtttccagtgtgactctcgccggccatatgacccagtctacaataccatc
agtcaccgcattgagaacgttatcacaacgtttaaaccacaccgcaagaagtcctggtgg
cagtcagagaatggaaagcctgatgtcttcattcaactggacctcgaggcagaattccat
ttcactcatctaatcatgaccttcaagacgtttcgcccagcagccatggtgattgagcga
tcggcagattttggacgtaactggcaggtgtaccgctactttgcctacgactgtgcctcg
gtcttccccgggatatccaaaggtcccctgcgcaaggtggatgatgtcacctgtgagtcc
cgctactctgacatcgagccatccacagagggagaggccatctacagagttttggaccct
gccatccgcattgaggacccctacagccccaacattcagaatcagctgaagatcactaac
ctgcgtgtgaacttcaccaagctgcacaccctgggtgacaacctgctggactcccgcgtg
gagatcaaggagaagtactactacgccatgtacgagctgatcatccgcggcaactgcttc
tgctatggccacgcctccgagtgtgcccccatcgatgggatcaaggatgaggagggcatg
gtccatgggaggtgtgtgtgtaagcacaacaccaagggtctgaactgtgagctgtgtgac
gacttccataacgacgtgccctggagaccggctgagggacgcaacaccaacgcctgcaag
aaatgcaactgtaacggtcactccaaccagtgtcactttgacatggcagtgtacctggcc
acaggcaatgccagcggtggcgtctgtgacgactgtctccataacaccatgggacgcacc
tgtgagatgtgtaaacccttctattacctgaaccccagcagggacatcagagacccagga
gtctgtagtgcctgtgactgtgatcctgatggttccctgaacgggggcatctgtgacggg
catgatgagccatccctgggcatggtcgctgggcggtgccgctgtaaggaccatgtggag
ggacctcgctgtgacaaatgcaagtctggctttttcggcctgagtgcagagaatccccgt
ggctgccaaacctgccagtgtgaccccaggggtacggtgtcagagagaccacagtgtgac
cctgtgagcggggactgtttctgcaagcgccaggtcaccggacgcagctgtggccagtgt
ctgccagaacactgggcactgagtcacgacctgaatggctgtagagactgtgactgtgat
gtgggcggagccacagataaccactgctcaatggagaatgggcagtgtcgttgtcgtagt
tatatggtgggccgtcaatgtacccaggtggagtctgggtacttcttcatggctctggac
cactatatctacgaggctgagctggccatgctgggacagggctgcagtgtggagcagagg
gagcaccagcctgggcgccctaccacctggactggcactgggtttgccaaggtcccagag
ggcagcagcctggatttctccatcaacatcatcccctactccatggagtacgacctcctc
atccgctatgagtcgcaaatgccacgggacttggaggaggtccgtgtgactatcattcgg
ccagggcccattcccaccagcagcccatgtggaaacaccatccctgcagacgacatgctc
actgtttccctgcctgcaggatccaggtttgtcgtgctgcctcaatctatctgcttggag
agaggagttagttacacgcttcactttgagttcagtcgctatctggaacggaacaatgtt
ctcattcccggtacaactgctgccaacattctagtggactctatttcccttctccctcgt
tactcctccctggagatgttcatcggcggagaccccgcctccatcgcccggaaacagagc
tacgagcgctaccgctgccatgacggggctaagagcgtgacacgcccccagatcagtgac
gtctgtgccaaactcatcaccagcatgtcagccatcattaaccatggagctttggcttgc
cagtgtgacccccagggttcagtcagctcagtgtgtgacatgcgcggaggtcagtgtcgc
tgtaggtccaatgtgattggacggcgctgtgaccactgtggtcctgggacgtacggcttt
ggacctgcaggatgtaaagcctgtgagtgtagtctggaaggtgcggtcactcggttctgt
gaccagctgactgggcagtgcccatgcagccagggtgcgtttggccagcggtgcgatggc
tgccaggcaggacactggggcttccccaactgtaagcagtgcctatgtaacggacacgct
gaggagtgccaccagaggaccggagcctgtctcaactgcagggaaaacactggaggggac
aaatgtgacaggtgtgccaacggttactacggcaacccggtgctgggcacaggtaacagt
aaccgatgccagccctgcccctgcccggatggcccaaacagcggaagatactttgctacc
tcctgtcaccaggacaaccgcaacagacaggtggtctgcaactgtaaccaaggatacaca
ggttcccggtgtgaggagtgtgcccctggttactatggtaacccctcccagccaggtggg
cggtgccagccgtgcaggtgcagtaacaacattgacatgtcagacctggatgcgtgtgac
cggaggacaggagagtgtgagaagtgtctctacaacacagagggaccagactgtggggtg
tgcaagagtggttactatggagacgcctcgcgacgcaactgcagaaagtgcacctgtaac
ttcctgggcacagagcaaacccagtgtacagcacgggatgagtgtgtctgccagcgtgcc
acggggcagtgccagtgtctacccaacactatcggcctgacatgtgaccactgtaagccc
aactactggaacctggctagtgggcggggctgtgaggcctgcggctgtgaacccaacaac
gctgtcaaccccgcctgcaacgagttcactggaaagtgtcagtgtcgtgacggatttggt
gggaagacctgtacagactgccaagagaactactggggtgacccaaggatccagtgtaga
ggtcagcattaa
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