KEGG   Salvelinus namaycush (lake trout): 120061852
Entry
120061852         CDS       T07522                                 
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein A1-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120061852
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120061852
   03041 Spliceosome [BR:snh03041]
    120061852
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     120061852
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120061852
Spliceosome [BR:snh03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    120061852
SSDB
Motif
Pfam: RRM_1 RRM_7 RRM_PARP14_3 Nup35_RRM_2 RBD_AKAP-17A RRM_3
Other DBs
NCBI-GeneID: 120061852
NCBI-ProteinID: XP_038867566
UniProt: A0A8U1F0M4
LinkDB
Position
2:34380840..34387344
AA seq 373 aa
MSKESPREPEQLRKLFIGGLSFETTDESLRTHFERWGSLTDCVVMKDPVTKRSRGFGFVT
YSSVDEVDASMEARPHKVDGRQVEPKRAVSREDSSRPGAHTTVKKIFVGGIKEDTEEHHL
RDYFDQFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRIVIQKYHTVNGHNCEVRKAL
SKEDMNRSGPRGGNFGRGGGYGGGFGGGRGGGGYGDNDGYNNYGGNGGGYGGGPGGYSGG
NRGYGGGGGGGYGNQGGSYGGGGGGYDNYNNGGGGGGSYRGGNYGASSGGGSSSGSGGGG
GGGGGDYNDFGNYNSQSSSSYGPMKGGGGYSGGSGGGRSSGPYGGGGGVGGGGGGYGGGS
GGGYGGGSGGRRF
NT seq 1122 nt   +upstreamnt  +downstreamnt
atgtcgaaggagtctccccgtgagccggagcagctccgcaagctcttcattggtgggctg
agcttcgagaccaccgacgagagtttgcggacccattttgaaagatggggatccctcaca
gattgtgtggtaatgaaagatccagtcacaaagagatcgaggggctttggctttgtcact
tacagctctgtggatgaagttgacgcatcaatggaggctcgtcctcataaggttgatggc
cgccaagtggagcccaagagagcggtgtccagagaggattcctcaaggccaggtgctcac
accactgtgaagaagatctttgtgggtggcatcaaggaggacacagaggagcatcacctt
agggactactttgatcaatttggcaagattgaagtcatcgacatcatgactgataggacc
agcgggaagaagagggggtttgcctttgttacatttgatgatcatgatgcagtcgatagg
attgtcatccagaagtatcatacagtgaatggtcacaactgtgaagtgaggaaggctttg
tcaaaggaagacatgaaccggtccgggccaagaggtggaaactttggtagaggtggcgga
tatggaggtggtttcggtggaggtagaggaggtggaggatatggtgataacgatggatac
aataactatggaggcaatggtggcggctatggtggaggtcccggcgggtatagtggtggc
aaccggggctatggtgggggaggcggcggcggttatggtaaccagggtggcagctatgga
ggaggaggaggaggatacgacaactacaacaatggaggtggtggtggtggaagctacaga
ggtggtaactacggagctagtagtggtggtgggagcagcagtggaagtgggggtggtggt
ggtggtggtggtggagactacaatgactttggcaattacaacagccagtcgtcctccagc
tacggcccaatgaaaggaggcggcggctatagcggcggcagtggagggggccggagcagc
ggcccatatggtggtggtggtggtgttggtggtggtggtggtggttacggaggaggctcc
ggtggtggatatggagggggctccggaggtcgaaggttctag

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