Salvelinus namaycush (lake trout): 120061884
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Entry
120061884 CDS
T07522
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-6-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120061884
04082 Neuroactive ligand signaling
120061884
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120061884
Ion channels [BR:
snh04040
]
Ligand-gated channels
GABA-A
120061884
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
SAP130_C
Motif
Other DBs
NCBI-GeneID:
120061884
NCBI-ProteinID:
XP_038867589
UniProt:
A0A8U1F0Z1
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Position
Sna17:complement(8247980..8280679)
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AA seq
559 aa
AA seq
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MVSAKKEMVTAMYPSYISTLFYFFCLIACVKRISGTIKKDDRIYPENFTRILDRLLDGYD
NRLRPGFGGPVTEVKTDIYVTSFGPVSDVEMEYTMDVFFRQTWVDRRLRYEGPIEILRLN
NMMVANVWTPDTFFRNGKKSVAHNMTAPNRLFRIMKNGTILYTMRLTISAECPMKLVDFP
MDGHACPLKFGSYAYPKTEVIYTWTKGPQYSVEVPPESSSLVQYDLIGHTVSSEEVKSIT
GEYVVMTVHFHLKRKMGYFMIQTYIPCIMTVILSQVSFWINKESVPARTVFGITTVLTMT
TLSISARHSLPKVSYATAMDWFIAVCFAFVFSALIEFAAVNYFTNAEMERLKRKPPKCPP
APQTTPVKVKDMEEVLQHNPDTNGNLRKRMNYMSQQDGQKAESNSTAAARGVTRKQPQSG
QSSSSKWATGGAIILPHSSPGPASQPNTSSLTLSAMNMPLAPPTTEKAMTIPANQSQPTA
DSSLQDLLGPRLEHIQLMGKNEPKQSPCSQPTTASMGGTSKIDKYARILFPVSFGAFNMV
YWVVYLSKDTMEAKFRGQM
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atggtttctgccaagaaggagatggtaactgcgatgtaccccagttacatttcgactctc
ttctactttttctgcttgattgcttgtgtaaagagaatctctggaacgataaaaaaggat
gacagaatatatcccgagaatttcacacgcattttagacagactcctggacgggtatgac
aacagactgcgacctggatttgggggtccggtgacagaggtgaaaacagacatttatgtc
acaagtttcgggcctgtctctgatgttgaaatggagtacaccatggacgtgttcttcaga
cagacatgggtcgacaggaggctgaggtatgagggtcctattgagatcctccgactcaac
aacatgatggtcgccaatgtgtggactcctgacaccttcttcaggaatggcaagaagtct
gtggcacacaacatgactgcccccaacaggttgttccgcatcatgaagaacggcacgatt
ctttacaccatgaggttgacaatcagtgcagagtgtcccatgaagcttgtggacttcccc
atggatggacatgcatgccctctcaagtttggaagctatgcataccctaaaacagaggtg
atttatacctggaccaaaggaccacagtattcagtggaggttcccccagaatcctccagc
ctagtgcagtatgatctcattggccacactgtcagcagtgaggaggtcaagtcaatcaca
ggtgaatacgtggtgatgacagtgcacttccacttgaagcggaaaatgggctacttcatg
atccagacgtatatcccctgcatcatgacagtaatcctctcccaagtgtccttctggata
aataaagaatcggtcccggctcgaacagtcttcggcatcaccacggtcctgaccatgacc
acgttaagcatcagcgcacgccactccctccccaaagtctcctacgccaccgccatggac
tggttcattgccgtgtgcttcgcctttgtcttctccgctctcatagagttcgctgccgtc
aactacttcaccaatgcagagatggagagactgaaaaggaagccgccaaaatgcccgccg
gcgccccaaacaaccccagtgaaagtgaaggatatggaggaagttctgcagcataaccct
gacaccaatggtaacctgcggaaacggatgaactatatgtcccagcaagatggccagaaa
gcagagtccaacagcacagcagcggcaagaggggtaaccaggaaacaaccccagtctggc
caatcatcttcatccaagtgggcaactggcggcgccatcatcctaccacactccagcccc
ggccccgccagccaacccaacacttcctccttgaccctgtctgccatgaacatgcccctg
gctccacccacaactgagaaagcaatgacaataccagccaaccagagccagcccaccgct
gactcctcgctccaggaccttctaggacccagactggagcacattcagctgatgggcaaa
aatgagcccaagcagtcgccatgctcccagccgaccaccgccagtatgggcgggaccagt
aaaatcgacaagtatgcccgcatcctgttcccggtgtcctttggcgcattcaacatggtg
tactgggtggtttacttgtccaaagataccatggaggccaaatttagaggccaaatgtag
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