Salvelinus namaycush (lake trout): 120061955
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Entry
120061955 CDS
T07522
Name
(RefSeq) LIM domain and actin-binding protein 1-like isoform X1
KO
K23026
LIM domain and actin-binding protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120061955
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
120061955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
Motif
Other DBs
NCBI-GeneID:
120061955
NCBI-ProteinID:
XP_038867671
UniProt:
A0A8U1H390
LinkDB
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Position
Sna2:34479167..34507396
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AA seq
753 aa
AA seq
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MEGGSSFSRKSWASQSLRVTARELSLVSTRGKTNAIAERFSKYQRAAEEANAEKKKASVG
SLPPTLRSGNLSVLKKRWEQPAPRQDKPSLLPAGPPRARLIPPAVPKPVPPTEPRPPAKS
PGSPGTQGSQDTAASRFQYPSAAIAKEGAERRMERKDQRPSEGEEEEGLMQVEEKVAPPS
PCSPVEKPSVPLNSLKMMFEKGESAKRRVSTGLHSSSSEDMDQRIGVLSPDRVLETTSLK
ERMAKYQSAVTKKGPLARTASQLEGEDGSLKENVPPSGVAVVSTYARVCVRACGESEKFG
VESQALESYSRKVAVAETNGDGMDTPTSKDSTSSPSSAHSDPPKAARKFCLPVRETCIAC
LKTVYPLERLVANTQIFHTSCFRCLHCNTKLSLGNYASLHGNVYCNPHFSQLFKAKGNYD
EGFGHRPHKELWTPRAEGEEEEEGVDREVEKKPKEQAERVAAVSLPASSAKQPSPTVEES
PLAKVTDLTASLETRSHTTSTEKLSSAEKIPEARKLRVAWPPPADSDAGTSQILEAGSGV
GRPWRAKWPPEGEVSLSTQSHDRTELKSLRRSSSLKERSRPFSVAPSLTTTNALGPREPR
RPLKSLLDRRGSLEDSRSMPREPEPKPQREREEERQESKIERKPAPPSGSVVDEETSSEE
EVESLPAAQEEKRDEPMKRGKEVEEASLKCQSASPDISASPSLSPQPKHNRSSQDVGFWE
GEEEGGEGEQLTVEEMIKRNRYYEEEEEEEDDV
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggaaggcggaagttcgttcagcagaaagtcgtgggcgtcgcagtctttacgggtcacc
gccagggagctctcattggtcagcacgcgaggcaagaccaacgccatcgcagagcgcttc
tccaagtaccagagagctgctgaggaggccaatgctgagaagaagaaagcatcggtgggg
agcctgcctcccactctgcgttcagggaacctgagtgttctgaagaagcgctgggagcag
ccggcacctcgccaagacaaaccctccctgctaccagccggcccaccccgcgcccgcctt
atccccccagccgtacccaaaccagtgccaccgaccgagccccgccccccagccaaatcc
ccgggatccccgggcactcagggtagtcaagacacagccgccagccgcttccagtatccc
tcagcagctatagccaaggaaggagcggagagaaggatggagagaaaagatcagcggcca
agcgagggagaggaggaggaagggctgatgcaggtggaagaaaaggtggcgccacccagc
ccctgcagccccgtcgagaaacccagcgtgcctctcaacagcctgaagatgatgtttgag
aagggagagagcgccaagagaagggtgagcacaggactacacagcagctcctccgaggac
atggaccagagaataggagtgttatcccctgaccgagttctggagaccacctccctgaag
gaaagaatggccaagtaccagtcagccgttaccaaaaagggcccactagcacgcactgcc
agtcagttagagggagaggacggcagcctcaaggagaatgtgccccctagtggtgtggct
gtggtcagtacctacgcgcgtgtctgtgtgcgtgcgtgtggcgagtctgaaaaatttggt
gttgagagccaggctttagagtcctacagcagaaaagttgctgtagcagagaccaatggt
gatggcatggacacacctacctctaaggatagtacctcttctccatcctcagcccacagt
gacccgcccaaggcagccaggaagttctgcctgcccgtgagggagacgtgcattgcatgc
ctgaagacggtgtacccgttggagaggctggtggctaacacccagatcttccacacctcc
tgcttccgctgtctgcactgcaacaccaagctcagtctgggaaactacgcctctctgcac
ggtaatgtctactgcaatccccacttcagccagctgttcaaggccaaaggcaactacgac
gaaggcttcggccaccggccccacaaggaactgtggacaccccgtgccgagggagaggag
gaggaagagggagtagaccgggaggtggagaagaagccaaaggagcaggcagaaagagtg
gcggcggtgtcccttccagcctcctcagccaagcagcccagccccacggtagaggagtct
cccctggccaaggtgacggacctgactgcctctctggagacacgcagccacactacctcc
actgagaaactctccagcgccgagaaaataccagaggcccgcaagctgagggttgcctgg
ccccctcctgctgacagcgatgctgggacctctcaaattctggaggctggtagtggtgtg
ggccggccctggagagccaagtggcccccagagggcgaggtgtcattgtccacccagagc
cacgacaggaccgagctgaagagcctgaggaggagctcgtctctgaaggagcgaagtcgg
cctttctcggtggcccccagcctcaccaccaccaatgccctcgggccacgggagccccgc
cgacccctcaaatccctgctggataggaggggatcactggaggacagccgctccatgcct
agggaaccagaaccaaaaccccagagggagagagaggaggaaaggcaggagagcaaaatt
gagcgcaagcccgccccgcccagcggcagtgtggtggatgaagagaccagctcagaggag
gaggtggagagtctgccggcggcacaggaggagaagagagatgagccgatgaagagagga
aaagaagtagaagaggcttctctgaaatgccaatctgcctctccggatatctcagcgtct
ccctctctgtccccgcagcccaaacacaaccgcagctcccaggatgtgggcttctgggag
ggcgaggaggaggggggggagggcgagcagctcaccgtagaggagatgatcaagaggaac
cgctactatgaggaagaggaggaggaggaagatgatgtctga
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