Salvelinus namaycush (lake trout): 120062010
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Entry
120062010 CDS
T07522
Name
(RefSeq) neuronal acetylcholine receptor subunit beta-2-like
KO
K04813
nicotinic acetylcholine receptor beta-2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120062010
04082 Neuroactive ligand signaling
120062010
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120062010
Ion channels [BR:
snh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120062010
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Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
DUF2417
DUF4537
ATP-synt_8
Motif
Other DBs
NCBI-GeneID:
120062010
NCBI-ProteinID:
XP_038867737
UniProt:
A0A8U1H3C1
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Position
Sna17:11255349..11267668
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AA seq
406 aa
AA seq
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MTTNCWLTQVWNDYRLVWDPEEYEGIKKVRLPSQHIWLPDIVLYNNADGNYEVSFYSNAL
VSNNGEVYWLPPAIYKSACKIEVRDFPFDQQNCTLKFRSWTYDHTEIDLILLSDFASRDD
FKPSGEWDIVSLPGRKNEDPSDITYLDITYDFIIKRKPLFYTINLIIPCVLITSLAILVF
YLPSDCGEKMTLCISVLLALTVFLLLISKIVPPTSLAVPLIGKYLMFAMVLVTFSIVTSV
CVLNVHHRTPSTHTMPRWVKRLFLHRLPSFLFMRRPGSSNIRERFRQKHQRRSYSDLKLR
DGESAKRYGWKISDLSENTEFRKRMTVKCHADVEEAVDGVRYVAEKMKIEDNDEGVIEDW
KYVAMVIDRLFLWIFVFVCITGTLGLFMQPLFQSYNTPTADDLEQN
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atgaccaccaactgctggctgactcaggtatggaatgactacaggttggtgtgggaccca
gaagagtatgagggcataaagaaggtccgcctcccgtctcagcacatctggctacctgac
atcgtcctctacaacaatgcggatgggaactacgaggtgtcattctactccaatgcgttg
gtctccaacaatggagaggtgtactggctgccccccgccatctacaagtcggcctgcaag
atcgaggtccgcgacttccccttcgaccaacagaactgcacgctcaaattccggtcctgg
acctacgaccacacggagattgacctgatcctcctcagcgacttcgccagccgtgacgac
ttcaagcccagcggcgagtgggacatcgtgtctctgccgggacgcaagaacgaagacccc
tctgacatcacctacctggacatcacctatgacttcatcatcaagcgcaagccactgttc
tacaccatcaacctcatcatcccctgtgtgctgatcacctctctggccatcttagtgttc
tacctgccgtctgactgtggagagaagatgactctctgcatctcagtcctcctggccctc
actgtgttcctgctgctgatctccaagatcgtcccgcctacgtctctagctgtccctctc
atagggaagtatctgatgtttgccatggtgctggtcaccttctccatcgtcaccagtgtg
tgtgtgctcaatgtgcaccaccgcacgccctccacacacaccatgccccgctgggttaaa
cgcctcttcctgcaccgcctcccctccttcctgttcatgcgtcggccgggcagctccaac
atccgggagaggttccgccagaagcaccagcggcgctcctactctgacctgaagctgaga
gacggggagtcggccaagcggtacggctggaagatcagcgacctgtcagagaatacagag
ttcaggaagaggatgacggtgaagtgtcacgcagatgtggaggaggcagtggacggggtg
cgctacgtcgccgagaagatgaagatcgaggataacgatgagggggtcatcgaggactgg
aagtacgttgccatggtgattgaccggctgttcctgtggatatttgtgtttgtgtgcatc
accgggacgttggggctgttcatgcagcccctctttcagagctacaacacacccacggca
gatgacctggagcagaactga
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