Salvelinus namaycush (lake trout): 120062011
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Entry
120062011 CDS
T07522
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-3-like
KO
K04808
nicotinic acetylcholine receptor alpha-6
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
snh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120062011
04082 Neuroactive ligand signaling
120062011
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
snh04040
]
120062011
Ion channels [BR:
snh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
120062011
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GFIT
Motif
Pfam:
Neur_chan_memb
Neur_chan_LBD
Pyr4-TMTC
TrAA12
DUF1286
Red1
Motif
Other DBs
NCBI-GeneID:
120062011
NCBI-ProteinID:
XP_038867738
UniProt:
A0A8U1GZV1
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Position
Sna17:11297335..11300895
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AA seq
476 aa
AA seq
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METNLWLRHVWNDYKLKWVPIEYDGLEFIRVPSNKIWRPDIVLYNNAVGDFLVEDKTKAL
LKFDGTITWIPPAIFKSSCPMDITYFPFDYQNCSMKFGSWTYDKAKIDLVLIGSKVNLKD
FWESGEWEIIDAPGYKHDIKYNCCEEIYPDITYSFYIRRLPLFYTINLIIPCLLISFLTV
LVFYLPSDCGEKVTLCISVLLSLTVFLLVITETIPSTSLVIPLIGEYLLFTMIFVTLSIV
ITVFVLNVHYRTPMTHTMPAWVRSVFLGLLPKVLLMRRPVDEGCPSSLGSGRGDGTGGGS
IGDGGVGGGASGTGKKRKNSIGGGIGGGCVQVDGGAVSAETGQAGAMNCVEYGEVQNKPN
FPCKGKEVPIPTIPPVVPPLAPSDPDLSKLPRALSSPPNVNAVVAFSVVSPEIKQAIESV
KYIAENMRTRNKAKEVEDDWKYVAMVIDRIFLWVFVTVCITGTLGLFLQPLISFFT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggagaccaatttatggctgagacatgtctggaatgactacaaactgaaatgggttccc
atcgagtatgacggacttgagttcattcgtgtgccctccaataagatctggaggccggac
atcgtcctctacaacaatgctgtgggagatttcctggttgaggacaagaccaaagctctg
ctgaagtttgacggcaccatcacctggatcccccccgccatctttaaatcctcctgcccc
atggacatcacctacttccccttcgactaccagaactgctccatgaagtttggctcctgg
acctacgacaaggccaagattgacctagtgctcatagggtcaaaggtgaacctcaaggac
ttctgggagagtggcgagtgggagattatcgacgcgccgggctacaaacacgacatcaag
tacaactgctgtgaggagatctacccagacatcacctactctttctatatcagacgcctg
cctctcttctacaccatcaacctcatcatcccctgtctcctcatctccttcctcaccgtc
ctcgtcttctacctcccctctgactgtggagagaaggtgaccctctgtatctctgtcctc
ctgtccctcactgtgttcctcctggtcatcaccgagaccatcccgtctacgtctctggtc
atccccctcatcggggagtacctcctcttcaccatgatcttcgtcactctctccatcgtc
atcaccgtgtttgtgctgaacgtccactaccgtacgcctatgacccacaccatgccggcc
tgggtccggtctgtgttcctggggttgctgcccaaggtgctgctcatgaggaggcctgta
gacgagggctgcccctcctccttggggagtgggagaggagatggaacaggaggtgggagt
attggagatgggggtgtaggaggaggagcgagtggaacggggaagaagaggaagaacagt
attgggggaggaatagggggcgggtgtgtgcaggtggacgggggtgcggtcagcgccgaa
acagggcaggcgggggcgatgaactgtgtggagtacggcgaagtgcagaacaagccgaat
ttcccctgtaaggggaaagaggtgcccatccccaccatacccccggtggtgccccctctt
gccccctctgatccggacctatccaaactgccccgagcgctcagcagcccgcccaacgtc
aacgcagtggtggccttctccgtggtgtcaccagagatcaaacaggccatcgagagtgtc
aagtacatcgctgagaacatgagaacacgcaacaaggccaaagaggtggaagatgactgg
aagtacgtagccatggtgattgacaggatcttcctgtgggtgtttgtgactgtgtgtatc
actggaactctgggactgtttcttcagcctctcatcagcttcttcacatga
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