Salvelinus namaycush (lake trout): 120062063
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Entry
120062063 CDS
T07522
Symbol
pdlim3b
Name
(RefSeq) PDZ and LIM domain protein 3b
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
120062063 (pdlim3b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120062063 (pdlim3b)
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
120062063 (pdlim3b)
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GFIT
Motif
Pfam:
DUF4749
PDZ
LIM
PDZ_6
PDZ_2
Arc_trans_TRASH
Motif
Other DBs
NCBI-GeneID:
120062063
NCBI-ProteinID:
XP_038867797
UniProt:
A0A8U1H3F6
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All DBs
Position
17:23391267..23416233
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AA seq
315 aa
AA seq
DB search
MPQNVVLDGPAPWGFRLNGGKDFNQPLTITRVTPGSKASLANLCPGDIILAIEGVSTECM
THSEAQNKIKDPASQLGLKIERPETKLWSPQVTEDGKANPFKLNLEAEQQELKPIGTGHN
RRAQPFMAAATIANGRQVVSSSYNTPIGLYSSGNIQDALHGQLPGLVHDKHEGGKTLSSI
KESHVYRMLQDDQDRPHEPRQSGSFKALQEHVETDGAKPLITRSVRAPVTKPPTPAGSLQ
KLPLCDKCGNGIVGTVVKAREKFRHPGCFVCSDCKVNLKQRGYFFVEGQLYCETHARART
IPPEGHDVITVYPTA
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgccccagaatgtggtcctggatgggccagccccctggggcttcaggctcaatggaggg
aaggacttcaaccagcccctgaccatcaccagggtgacgcctggcagcaaagcctcgctg
gccaacctgtgccccggtgacatcatcctggccatagagggtgtgagtacagagtgcatg
actcacagcgaggcccagaacaagatcaaagaccctgcctcccagctcggcctcaagatt
gagaggcctgagaccaaactgtggtctccccaagtcacagaggatgggaaagcaaaccca
ttcaagctcaatttagaggcagaacagcaagagttgaaacctatcggtacaggtcacaac
cgacgtgcccagcccttcatggctgcggccaccatagccaacggacgccaggtggtgagt
tcctcctacaacacccccataggcctctactcctcaggcaacatccaggacgccctgcac
ggacagctcccaggccttgttcacgataagcatgagggtggtaagacactgtcctccatc
aaggagtctcatgtgtaccggatgctccaggatgaccaggataggccacatgaaccacgt
cagtcaggctcctttaaggctctgcaggaacacgtggagactgatggagcaaagccgttg
attactagaagtgtaagagctccagtgacaaagcctcctacacctgcgggatcgctacag
aaactacccctctgtgacaagtgtggaaacggcatagtaggcacagtggtgaaggccaga
gaaaagttccgccaccctggatgttttgtgtgctccgactgcaaagtcaacctgaagcag
aggggctacttctttgtggaggggcagctgtactgcgagacccatgcccgcgcccggacg
atacctccagagggacacgatgtcatcaccgtttaccccacggcttga
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