Salvelinus namaycush (lake trout): 120062103
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Entry
120062103 CDS
T07522
Name
(RefSeq) tumor necrosis factor ligand superfamily member 13B-like
KO
K05476
tumor necrosis factor ligand superfamily member 13B
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
snh04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120062103
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
120062103
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120062103
04090 CD molecules [BR:
snh04090
]
120062103
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Tumor necrosis fators
120062103
CD molecules [BR:
snh04090
]
Proteins
120062103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNF
DUF7237
FA_FANCE
Motif
Other DBs
NCBI-GeneID:
120062103
NCBI-ProteinID:
XP_038867842
UniProt:
A0A8U1H3I1
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Position
Sna17:38118037..38135080
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AA seq
255 aa
AA seq
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MLYHALLLVSTLTVFFSFFLVYKVTVLEDDISKLRGDISNLKPHSNESTDGMRTGMSRTW
ERSKQATSLNSQRQTEKDSQTLCSSTASSQTLGSPTASSLRMKQEPAGCSGGTVVVQQSF
LQLSANTKKQPFVRGNVTVIPWTVALHQGEAISSTGDRIIIQQEGLFIVFGQVLFQSPGT
IMGHIVRSRGTGQRSTELLRCLQEMPQTNCANTCYTGGMVKLEREDELELVIPDRPQAQV
SMDADSTFFGIIRLN
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgctgtaccatgctttactattagtatcaacattaactgtgttttttagcttcttcctt
gtatacaaagtaacagttctagaagatgacatcagcaaactcagaggagatatttcaaac
ctaaagccacattctaacgaatccacagatggaatgagaacgggtatgtccagaacatgg
gagagatcaaagcaagcaacttccctaaattcacagagacagacagagaaagactctcag
actctgtgttcgtcaacagcatcctctcagactctgggttcaccaactgcgtcctctctg
agaatgaaacaggagccggcaggctgcagtggaggtacagtagtcgtacagcagtcgttt
ctgcagctgtcagccaacacaaagaaacagccatttgtcagaggaaatgtgacggtgatt
ccttggacagttgccttgcatcaaggggaggccatctcttccactggagacagaatcatc
atccaacaagaaggcctcttcatagtgtttggtcaggtgttgttccagagtccaggcacc
atcatgggtcacatagtgcgtagtcgaggaaccggtcagagatccacagagctgctccgc
tgtctacaggagatgccccagaccaactgtgccaatacctgctacactggaggcatggtg
aagctggagagagaagacgagctggagctggtgatcccagatcgaccccaagcccaggtc
tccatggacgcagactcaaccttctttggcatcatacggctgaactga
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