Salvelinus namaycush (lake trout): 120062106
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Entry
120062106 CDS
T07522
Name
(RefSeq) transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
120062106
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_5
LRR_LRWD1
LRR_9
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
120062106
NCBI-ProteinID:
XP_038867844
UniProt:
A0A8U1F1H3
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Position
Sna17:complement(38228220..38231628)
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AA seq
679 aa
AA seq
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MIRPTETTFSLVLLLVLLLYCSLSHSLIQFNTVTGRIHDDQQETTSWRFRNLSSVPEGLD
VRLRELDLSNNVIRHINSQSLGLPSLLRLDLSYNQLEIISEGAFRDVAQLQELNLARNAL
SHNVDSNSRALGSLHRLRRLDISMNGLDDDAAELYLRDKSILERLDLTGNGLTRLTPKLF
AESLSVTSVRIENNLITAIEEGTFEPLKELKILNLARNNLVYICDFKLYQVKLLNLSRNS
IEFFVTREDGHPYELEILDLSFNNLLYFPMVPKTNRLRYLHLQSNMVGTLETDTLISEAD
SLYRELTSEDEVNDAAANSNIYSNWRLMPLVYMDLSSNHFRSLPVETLSHLTSLVTLNLS
KNCLQDISYNTTKGGSGHDGGYHRPSLTFPSLRYLDLQNNGLRQLSTFFLEALPNIETLN
LKENSVRPCDPKDQLGPSETTRVSLNSMSSCVSFWNIKTLRSLDLQDNGIKTLHQNTFER
TPLVSLNLASNVDIILDNGALEGLQSSLQSLSISGNNMTTSALSLPCLKALRRLNMSNNN
VDVVPSIISCSPLTELDVRNNGLTSMNESLVDRLSLDLDVLYVSGNSFNCCDTKWLKALN
REKVKIPDLDRAVCLSVNGTLLTGLLPNHSLHCSLELSPKITEPNLGQIIIIILFVSIVL
ITLVVFVKKVCCNTGSFIV
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atgatcagacctacagagacaacattcagcttagtgctactgctagtcctactgctgtac
tgctccctgtctcacagtctcatacagttcaacactgtgactggaaggatacacgatgac
caacaggagacgacttcctggcggttcaggaacctatcatctgttcctgaggggctggac
gtgaggctgagggagctggatctgtccaacaacgttataagacatataaacagccagagt
ctgggtcttccatccctactgagactggacctcagctacaaccagctagagatcatatct
gaaggggctttcagagatgtggcccagcttcaagagctgaacttggccaggaatgcattg
agccacaatgtggacagtaacagccgagctcttgggtctctccacagactgaggaggttg
gatatctctatgaacggtctggatgatgacgcggcagaactttaccttcgtgacaaatca
attcttgaacgcctagatctcacgggcaacggtttgacgcgactcacgcccaagctgttt
gcagagagcctgagcgtgacaagcgttcgcatcgagaacaatctgatcacggcaatagag
gagggaacgtttgaaccgttgaaggaactcaagatcttaaatttagccagaaataatcta
gtctacatctgtgattttaaactctatcaggtgaaactcttgaatcttagcaggaattcc
atagagttctttgtcacccgtgaggacggtcatccatacgagctggagatcttagatctg
agcttcaacaacctcctctatttccccatggtccccaagaccaaccggttgagatacctc
cacctacagagcaacatggtggggaccttagagacagacaccctaatatcagaggcagac
tctctgtacagagaactaacaagtgaagatgaggtaaatgatgctgcagccaacagcaac
atatactctaactggagactgatgccgttagtttacatggacctcagtagtaaccacttc
aggtctctacctgtggagactctgagccatctgacgtctttggtgacgctgaacctcagc
aagaactgtctacaggacatcagctataacacaacgaagggcggcagcggccatgatgga
ggctaccaccgaccttccttgacctttccgtccctacgctacttggacttgcagaacaac
ggtcttcgacaactctccaccttcttcctggaagccctaccaaacatagagacgttaaac
ctgaaggagaactctgtgaggccgtgtgatccgaaggaccaactgggaccatctgagaca
acgagagttagtcttaatagcatgtcctcctgtgtttccttctggaatatcaaaactctg
agaagtctagatctccaagacaacgggatcaaaacactccatcagaacacatttgaaaga
acccctttggtttctctcaacctggccagcaatgtagatataatcttggataatggcgct
ctagaagggttgcagagtagtctccagtctctgagcatcagtgggaacaacatgacaacc
tctgccttgtctctgccttgtctgaaagcattgagacgactcaacatgtccaacaacaac
gtagacgtcgtcccgagcatcatcagctgttctcctttgaccgaacttgacgtgagaaat
aacggcctaacgtctatgaatgaatctttggttgatcgtttgtctctagatcttgatgtg
ttgtatgtcagtggcaactcgttcaactgctgtgacaccaaatggctcaaagccctaaac
agagagaaagtgaagataccggaccttgaccgtgctgtgtgcctcagtgtcaatggtact
ctgttgactggccttctgcctaaccattcactgcactgttcattggaacttagcccaaag
ataacagaaccaaaccttgggcaaataataatcatcattttgtttgtgtcgatagtattg
ataacattagttgtatttgtgaagaaggtttgttgcaacacggggtcattcattgtgtaa
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