Salvelinus namaycush (lake trout): 120062115
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Entry
120062115 CDS
T07522
Name
(RefSeq) leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 3
KO
K24491
leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120062115
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
120062115
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Motif
Pfam:
LRR_8
Ig_3
I-set
LRR_4
Ig_2
ig
fn3
LRR_5
C2-set_3
V-set
C2-set_2
LRR_14
LRR_EndoS
Motif
Other DBs
NCBI-GeneID:
120062115
NCBI-ProteinID:
XP_038867854
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Position
Sna17:6034938..6055016
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AA seq
645 aa
AA seq
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MHRLLYAHVFLCCFSVAHSFCPSQCTCVYHGRSDGTGTRSVLCNDPDMSDIPVNVPIDTV
KLQVEKTAVRRIPTEAFYYLNDLRYLWITYNSISSVDAAAFYNLKVLHELRLDGNLISTF
PWKSLKEMPSLRTLDLHNNRLNTVAVEATPYLVNITYLDISSNKLTTLSSDFVDIWLPFN
GMPVSSNLSQKVVLGLQDNPWVCDCRISKLIELSKMSDTSVVLMDQFLSCSEPENLAGVM
FQRVELDQCLKPSVMMSATKITASEGSNVLLRCDATGYPTPTLIWTTSDGSRVNNTVVQE
SPGEGVRWSIISLNGVSYKDNGEYSCKAKNFAGNAEAAITLSVAGYVTTNMPPERPNIEA
ARNSPSTTSSAPETGFSNSPSAPSTTTAPPTTTHPAILPPILTKKKPTPSNVQQIAPSKP
SEIAQGSDRKLAADQSEKKDASKSVQDLEIVEETQDSAVLLWTTEGLPSNAPLTVVYSTY
DEEDNSKRTMDTDAGSGKVLLEGLTSGMRYQVCLVSKGSAAGKDPCINFFTLDLVEDNAA
NKLLMIISSFACAVALPVIGLLVYKILSLYCRSNVPSSDEELSKDTYVKFETISMKQRTL
HANPAELWTYRQTKESQERMLLCSRSSIDSQMTYKSDSSRSEFLC
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcatcgtcttctctacgcccatgtcttcttgtgctgcttcagtgtggcccattccttc
tgtccttcccagtgcacttgtgtttaccacggacggagtgatggaacggggaccagatcg
gtgctatgcaatgacccagacatgtccgacattccggtcaacgtccccatagatacggtc
aaactgcaggtggagaagacggctgtacggcgcatccccaccgaggccttctactacctg
aacgacctgcgctacctgtggatcacctataactctatctcctctgtggacgctgccgcc
ttctacaacctcaaggtcctccacgaactgcgtctggacgggaacctgatttccaccttc
ccctggaagtccctgaaggagatgcccagtctgaggacgctggatcttcacaacaaccgc
ttgaacactgtggccgtggaggctaccccatacctggtcaacatcacctatctggatatc
tccagcaacaagctgaccactctgtcttcggacttcgtggatatctggctgcctttcaac
ggaatgcccgtctcctccaacttgtcccagaaagtggtgctaggtcttcaggacaacccg
tgggtctgcgactgcaggatctcaaagctgatcgagctttccaaaatgtctgacacgtca
gtggtactaatggaccagttcctgtcttgcagcgagcctgaaaacctggctggtgttatg
ttccaaagggtggaactggaccaatgtctcaagccatccgtcatgatgtcagccaccaag
atcacagcctcggagggcagcaacgtgctcctgcgctgtgacgccacgggttaccccacg
cctaccctcatctggactacttcagatggctcacgtgtcaacaacacagttgtccaggag
tctccaggagagggtgttcgatggtccatcatcagcctgaatggggtctcgtacaaagac
aacggggagtacagctgcaaggctaagaacttcgccggcaacgcagaggctgccatcacc
ctgtctgtggcaggttatgtcactacaaacatgcctccagagaggcccaacatagaggct
gcaaggaatagcccatccacaacgtcctctgctccggaaactggcttctcaaactcccct
agcgccccatctaccaccaccgccccacccacgaccacgcatccagccatcttgccaccc
atcctcaccaagaagaaacccacgcccagcaacgtgcagcagatagcaccatccaaacca
tccgagattgcgcaaggcagcgacaggaagctagcggcggatcagagtgaaaagaaagat
gcttccaagtctgtccaagatcttgagatcgtggaggaaacgcaggacagcgcggttcta
ctctggacgaccgaaggtttgccaagcaacgcacctctcaccgttgtttactccacttat
gatgaggaggacaactccaaaaggacaatggataccgatgctgggagtggcaaagttcta
ctcgaaggcttgacttctggaatgaggtaccaggtctgtctggtttccaagggaagtgcc
gcgggaaaagacccctgtatcaacttcttcaccctggaccttgttgaggacaatgctgcg
aacaagctgctgatgatcatcagcagctttgcctgcgccgtggctttacctgtcattggt
ttgctggtctacaagatcctctcactctattgcaggagcaatgtgccttcttcggacgag
gagctatctaaagacacgtatgtgaagtttgagacgatatcaatgaagcagaggaccttg
cacgctaatcccgctgaattgtggacctacaggcagaccaaggagtcccaagagaggatg
ctcctctgctccaggtcgagcattgactcacaaatgacatacaagagtgacagttccaga
tcagaatttttgtgctag
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