Salvelinus namaycush (lake trout): 120062186
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Entry
120062186 CDS
T07522
Name
(RefSeq) growth/differentiation factor 9-like
KO
K22673
growth differentiation factor 9
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
120062186
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04052 Cytokines and neuropeptides [BR:
snh04052
]
120062186
Cytokines and neuropeptides [BR:
snh04052
]
Cytokines
Transforming growth factors (RSTK binding)
120062186
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GFIT
Motif
Pfam:
TGF_beta
Ank
Ank_5
Ank_2
Ank_3
Ank_4
Motif
Other DBs
NCBI-GeneID:
120062186
NCBI-ProteinID:
XP_038867918
UniProt:
A0A8U1H059
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Position
Sna17:31125186..31131066
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AA seq
485 aa
AA seq
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MVRNILDISKKRGTDVDVNSMTQAGYTPLHVAVIHGHDGVVTLLVRDYGVNTLSRLMGQR
RQTPRCGLSLGSSPTTSNLADEFGDSALYQHGSILSPLLKALTAQGDTWRSTPVMRPESR
YVRYMKRLYRISSRHERSSEGNHLYNTVRLITPRDECLEQSKKFFMQDLSYNLGRVRAKE
QLLKSVLLYSFDQEQATSITNQCYQDLKEQDTHNQCPLCPSTHHSVNFLFHTDRRRKWVE
VDITAFLRPLIQSHKKDIHLLINLTCVEDRGRGAKAGGEEWSGRGPVELHLRSPSLLLYL
NDTSELAHQRWLPTRSQGHPRSANEVNTLESLAEFKPEQRISQSERRRLRRESPYLSTNN
TGGKTSTKTVLPDLLPSSDFPTSDCALYDFRVSFSELKLSHWIIFPHRYNPRYCKGTCPR
AVGFIYGSPRHTFFQNMIYHKLDSSVPRPSCVPSEYNPLSVLTLEADSIAYKELDEMIAT
RCTCR
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atggtccgcaatatcctggacatctccaagaagagaggcacggatgtggacgtcaacagc
atgacacaggcgggttatactcctctacacgtcgctgtcatacacggacatgatggagta
gtaaccttgctggtgagagactatggagtgaatacactgagcagactgatgggacaaagg
agacaaacaccacgctgcggcctttcactcggatcgtccccgaccacgtcaaatctagct
gacgagtttggcgattccgctttgtaccaacatggcagtatcttgtcaccccttctgaag
gcgctaacggcacagggagatacatggcgatccaccccagtaatgagacccgagtcgaga
tatgttcgatacatgaaaagactgtacaggatatcttcaagacatgagaggagttcggaa
ggaaaccacttgtacaacacagttcgacttataacaccgcgggatgagtgcctggagcaa
agcaaaaagttcttcatgcaagacctctcctacaatttgggccgtgtcagagccaaggag
cagctgctgaagtctgtcctgctgtactcctttgaccaagagcaggccacgtccataact
aaccagtgttaccaagatttgaaagagcaggatacccacaatcagtgtcctctctgccca
agcacccatcactcagttaacttcctgttccacacggaccgcaggaggaagtgggttgag
gtggacatcacagctttcctccgccctctcatccagtcccacaagaaggacattcaccta
ctgatcaacctgacctgtgtggaggacagaggcagaggggctaaggctggaggagaggag
tggagcggtaggggccccgtggagctccacttaaggtctccgtccttgctcctgtacctc
aacgacaccagcgagctggctcaccaaagatggctgcccaccaggtcacaaggtcatccg
aggtcagccaatgaggtgaacaccttagagagcctggcggagttcaaaccggaacaaagg
atcagccagagcgagaggaggcggctgaggagagaatctccatatctgtcgacgaacaac
acaggaggcaaaacgagcacgaagaccgtcctcccggacctcctcccgagttctgacttc
cctacgagcgactgtgccttgtacgacttcagagtgagcttcagtgagctcaaactgagc
cattggatcattttcccccacaggtacaaccccaggtactgtaaaggcacctgtcccagg
gctgtggggttcatctacggctcccccagacacaccttcttccagaacatgatctaccac
aaactggactcctctgtgccaagaccttcctgtgttccttcagagtacaaccccctgagt
gttttaacccttgaagctgactccattgcgtacaaggagttagatgaaatgatcgctacg
aggtgcacatgtcgctaa
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