Salvelinus namaycush (lake trout): 120062212
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Entry
120062212 CDS
T07522
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120062212 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120062212 (atrx)
03036 Chromosome and associated proteins [BR:
snh03036
]
120062212 (atrx)
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120062212 (atrx)
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120062212 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
120062212
NCBI-ProteinID:
XP_038867941
UniProt:
A0A8U1F1B1
LinkDB
All DBs
Position
Sna17:38343966..38422279
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AA seq
2128 aa
AA seq
DB search
MTKEYSKMSKASAESTDQMMEEEVGQPPITDQMMEEEEVDQHPITDQMMEEEEEPGSSAE
TERPSSSHTKRKPAVAAKHTGGNKSDASDESGQEDGASDNPSDGMLVVRPPAGTDNKESR
GAMKLRVELSRRKTDTTLQERIDCTACGQQVNHFQRHSVFEHPMLHVLLCKSCYKYYTSD
DINKDEDGMDEQCRWCAEGGNLICCDYCHNAFCKKCVLRNLGRKELSMITDDDSKWSCYI
CSPQPLSDIASNCSNIMTKLESFWRTGRKKEREVKGHSKAKGHHHHGKAVVNGKEHSDGS
GTLTFSYKTLKVPKELVKRTKKLIETTTGLNNTFIHFIQQAEEEQGAGGGGSGTRHLKAF
RSVLADLKKAHAALEEDLESQFISPDQGLQNGDAVSNTDGHDQIDNMVEDGQEAEEDKMA
DTEDGEELEEDGGLSEDAEMEGSPAPQDHSDTETDSQAKDQTAVKVEEEEEEEEEEEEEE
EDGEEDDRDKDIVSVGPSVPDELFQMVESLADSAGLTPGNDAMEPTAASQSESPAAGSNR
KSLETHKEKAMPKVKNLIVKLTPVPVVTTRTSRSKSKDGGKERSKDGGKERSKDGGKERS
KVGGKEKERSKDGGKEESEVEEGAGSEEDSRRSSRTKTTPLRKSPDGKNKMAESSQENSD
SETPSRLKSRTKGSSEKEREEEEEQSNASSKVTADPSKQEVDSDSDEVPDILLQTAEAEQ
SSDEDAQQDADGNEGNRSFKRCQFKLSKKDGEEEENDKVKTEKKLAAKRKLKVDDSDNSE
SDSDEDAKKKKKKSSTASAKKTSKKKNSDGSSNSDSDLEKEMKGLSKLGPGKRRSSRVKK
EREEKENKGGDRRRSYELKRKARGRGAKQQDSSSDDVEEEGGEGGSGEESGDQQKIKPIV
EETVVAGRGTFHQSSGDEGKHDASQMADEEDDDPENRIAKKMLLAQIKANYSSGAEESSD
EDGEEKEQKKGKGGEEQEEEEDDDDDDEGGSGSDVDVKKSVGRRHRLLRHKLTLHEVESG
EKEKPASKGKKETKRNRRKVGSDDSADSDFKEAASSSESGVSEEISEKESSSEEESESEK
EGSSHRRTTRSSKKKKKKKKKEERSYAQKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDT
PKGQRKKIRKILKDDKLRMETRDALKEEEERRRRISEREQLREKLREVLVVEEASAVACP
ITTKLVLDVDEETKEPMVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKTSKNSGSGCIL
AHCMGLGKTLQVVTLLHTLLLCEKLDFSTALIVCPLNTVLNWLNEFEKWQYGFKDEESLE
VTELATVKRPQERAAALQQWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPG
PDFVICDEGHILKNEASAISKAMNSIKTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGS
VKEFRNRFVNPIQNGQAADSTDQDVRIMKKRAHILYEMLNGCVQRRDYSALTKFLPPKHE
YVVSVRVTPIQCTLYRHYLEHLTGAGNVVEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLD
YISKENKGYFDEDSMDEFIASETEESSLSMTSEDEKQKKKKKRGKARKKDSDSDSDALEV
IKEWNTSSRGGDPSSRNRAEPEEEVRPASSPGTRSPDWHKEFVTEADSEILEHSGKMVLL
FEILRMAEEVEDKVLVFSQSLISLDLIEDFLELAGRAKEEEKPSPYKGEGKWFRNIDYYR
LDGSTNALNRKKWAEEFNDYSNVRGRLFLISTRAGSLGINLIGANRVIIFDASWNPSYDI
QSIFRLYRFGQLKTCYVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELT
ELYAFEPDLLDDPTGKKSKRTTPMLPKDPFLAELLHSNKEQIVGYHEHDSLLDHKEEEAL
SEEDRKAAWAEYEAEKKGLSMRVNHGAYGGQMDMGGANSFFPFNVAALASMSNPQLEELI
NQGRQKVMEATNALKFLPRESLEDTIGRVWRENPALTESQVHAMALGRQASVEMELKHRE
AVYRDVLNKQQTLMMYVQKVITNRKVREQQIAMANQAQLMSQMNGMLGAGGMSQMELLGL
YQQLGALQGHPTHPSMGGKNPGPSKGNL
NT seq
6387 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagagtacagtaaaatgagtaaggcctcagctgaatctacagaccaaatgatg
gaggaggaagtaggtcagcctccgattacagaccagatgatggaggaggaggaagtagat
caacatccgattacagaccagatgatggaggaggaggaggaacctgggagctcagcagag
actgagagaccctcctcttctcacaccaagaggaagcctgctgtcgcagccaagcacact
ggagggaataagtctgacgcctcggacgagagtggacaggaagatggggcctctgacaac
ccctcagatggcatgttggtggtacggcctcccgctgggactgacaacaaggagagcaga
ggagccatgaagctccgagtggaactctcaaggagaaagacagataccactctgcaggag
agaatagactgcaccgcctgtggacagcaggttaaccacttccagcgccactcagtgttt
gagcaccccatgctccatgtgctcctctgcaagtcgtgctataagtattacaccagcgat
gacatcaataaagacgaggacggcatggacgaacagtgcaggtggtgtgctgaaggcggt
aacctgatctgctgtgactactgccacaacgccttctgtaagaagtgcgtcctgcgtaac
ctggggcgcaaggagctgtccatgatcaccgacgacgacagtaaatggtcctgctatatc
tgcagccctcagcccctctcagacatcgcctccaactgctccaacatcatgaccaagctg
gagagcttctggcgtacgggacgcaagaaagagagggaggtgaaagggcacagtaaggct
aaaggtcaccaccaccatggtaaagctgtggtgaacggtaaggagcattcagacgggtca
gggaccctcaccttctcctataagaccctgaaagtccccaaggagctggtgaagaggacc
aagaagctgattgagacgaccacagggctcaacaacaccttcatccatttcatccagcag
gctgaggaggagcagggagcaggaggaggtggcagcgggaccagacacctcaaggccttc
aggtctgttttggctgacctgaagaaggcccatgctgccctagaggaggacttggagtca
cagttcatttccccggaccaggggctgcagaacggggatgctgtctccaacaccgacggc
cacgaccagattgacaacatggttgaggatggacaggaggcagaagaggataaaatggcc
gacactgaggatggggaggagctagaggaggatgggggcttgtcagaggacgcagagatg
gaggggagccctgcgcctcaggaccactcggacacagagacagacagccaggccaaagac
cagacagcagtgaaagtggaggaggaagaagaagaagaagaggaggaggaggaggaggag
gaggatggagaggaggatgaccgggataaagacattgtgtccgtcgggccgtccgtccct
gacgagctcttccaaatggtagagagtctggcggactccgcagggttaacgcccggcaac
gacgccatggaacccacagctgctagccaatccgagagccccgccgccggctcaaacagg
aagtcacttgaaacccataaggagaaggccatgcccaaggtgaagaacctgatcgtgaag
ctgacacccgttcccgtggttaccacacgcacctccaggtctaagagtaaggatggaggg
aaggagaggagtaaggatggagggaaggagaggagtaaggatggagggaaggagaggagt
aaggttggagggaaggagaaggagaggagtaaggatggagggaaggaggagagtgaggtg
gaggaaggtgcgggctctgaggaggacagccgtcgctccagccgcacaaagaccacaccc
ctcaggaagtcaccggacgggaagaacaagatggccgaatcctctcaggagaacagcgac
tcagagactcccagcaggctgaagagtagaaccaaaggcagctcggagaaggaacgtgag
gaggaggaggagcagagcaatgcctcctccaaggtgaccgctgacccttctaaacaagaa
gtggactctgactctgacgaggttccggacatcctgctccagactgcagaggcggaacaa
agctcggacgaggatgcacagcaggacgccgatggtaacgagggtaacaggagcttcaaa
agatgccagttcaaactcagcaagaaagacggagaggaggaggagaatgacaaggtgaag
actgagaagaagctggcggccaaacgcaaactgaaagtcgacgattcagacaactcagag
tccgactcagacgaagacgcgaagaagaagaagaagaagtcctccacggcttctgccaaa
aagacatccaagaagaagaactcggacggctcctctaactccgactctgacctggagaag
gagatgaagggactcagcaaactggggccggggaaacggaggagcagccgcgtgaagaaa
gaaagagaggagaaggagaacaagggcggggatcggaggcggtcgtacgaactgaaacgc
aaagccagaggtagaggagccaagcaacaagattcatcgtctgatgacgtggaggaggag
ggaggagaaggagggtcgggagaggagagtggagaccagcagaagattaaacccatcgtg
gaggagacggtggtagcagggaggggaaccttccaccagtcctcaggagatgaaggtaaa
catgacgcttctcagatggctgatgaggaggacgatgatccagagaacagaattgccaag
aagatgctgctggcccagatcaaggctaactactcttcaggagcggaggagagctctgac
gaggacggagaagagaaggaacagaagaaggggaagggaggagaggagcaggaggaggaa
gaagacgatgatgatgatgatgaagggggttctggctctgacgtggacgtgaagaaaagt
gtggggcgtcgccaccggctgctccgccacaaactgacgctgcacgaagtggagtcggga
gagaaggagaaaccagccagcaaggggaagaaggagaccaagaggaacagacggaaagtg
ggtagtgatgactcagcagactcagactttaaggaggcagcgagcagcagtgagtcagga
gttagtgaggagatcagtgagaaggaatcgtcgtcagaggaggagtcggagtctgagaag
gaaggcagtagccacaggaggaccactcgctcctccaagaagaagaagaagaagaagaag
aaggaggagaggagctacgcccagaagaagaaacggcgccgcatcaaggtccaggattct
tcatctgacgagaagagcgggtcaggagaggacggctcggggaaggaggatggagacact
cctaaaggacagaggaagaagatcagaaaaatcctcaaggacgacaagctgaggatggaa
acgagggatgccctgaaggaggaggaggagaggaggagacgcatctcggagagggagcag
ctcagggagaaactcagagaggtactcgtggtggaggaggcgtctgccgtggcttgtcca
atcacaaccaagctggtgctggatgtagacgaggagaccaaggagcccatggtgcaggtc
caccgcaatctggtcactaaactcaaaccacaccaggtcgacggggtccagttcatgtgg
gactgctgttgtgagtcggtgaagaaaaccagcaagaactctggttctggatgtatcctg
gctcactgtatgggcctgggaaaaacactgcaggtggtaaccctactccacacactactg
ctgtgtgaaaagttagacttttccacggctctgatcgtctgtcctctcaacacggttctc
aactggctcaatgagtttgagaagtggcagtacggcttcaaggatgaggagagtttagag
gtgacggagctggccacggtgaagcgacctcaggagagagcggctgctctgcagcagtgg
caggaggatggagggatcatgatcattggctatgagatgtaccgtaacctcacacagggt
agaaacatcaagagcaagaaactcaaagagaccttccagaagaccctggttgacccaggc
ccagactttgtgatctgtgatgagggccacatcttgaagaacgaagcgtcggccatctct
aaagccatgaactccatcaagacccgacggagagtggtgctcaccggcacaccactgcag
aacaacctcatagagtaccactgcatggtgaacttcatcaaggagaacctgctggggtca
gtgaaggagttcaggaaccgcttcgtcaaccccatccagaacgggcaggcagcagactcc
acggaccaggacgtacggatcatgaagaagagggctcacatcctctacgagatgctcaat
ggatgtgtacagagaagagactactctgccctgaccaagttcctgcctcctaaacatgag
tacgttgtgtctgtcagagtcacgcccatccagtgtactctataccgacactacctggag
cacttaacaggtgcggggaacgtggtggaagggggtcggggtcgagccgggaccaaactc
ttccaggacttccagatgctcagcagaatctggacccatccctggtgcctgcagctggac
tacatcagcaaagaaaacaaggggtactttgatgaggacagcatggatgagttcatcgct
tcggagaccgaggaatcttctttaagcatgacctctgaagacgagaaacagaaaaagaag
aagaagcgggggaaagccaggaagaaggacagcgactcagacagtgatgctctggaggta
ataaaggaatggaataccagctcccgaggaggagacccttccagccgtaaccgggcggag
ccagaggaggaagtgcgtccagcctccagccctggcaccaggagtcctgactggcacaaa
gagtttgttacggaggccgactctgagatcctggagcattctgggaaaatggtgctgctg
tttgagatcctccgcatggccgaggaggtggaggacaaagttctggtgttcagtcagtct
ctgatctctctggacctgatcgaagacttcctggagctggctggccgagccaaagaggag
gagaaaccctctccttacaaaggtgaagggaagtggttccggaacatagactactaccgt
ttggacggctccaccaacgccctgaaccggaagaagtgggccgaggagttcaatgactac
agcaacgtccgaggtcggttgttcctgatctcgaccagggctggttctctgggcatcaac
ctgataggagctaaccgggtcatcatctttgacgcgtcctggaacccgtcgtacgacatc
cagagtatcttcagactctaccgcttcggacagctcaagacctgctacgtctaccgattc
ctggctcagggtactatggaagagaagatctatgaccgccaggtggctaaacagtctctg
tccttccgagtggtggatcaacagcagatcgagagacatttcaccatgaatgagctgaca
gagctctacgcctttgaacctgaccttctggatgatcccactggcaagaagagcaagagg
accactcctatgctgccaaaggaccccttcctagctgagctgctccacagcaataaggag
cagattgtgggctatcatgaacacgactccctgctggatcacaaggaagaggaggctctc
agcgaagaggaccgcaaagcagcctgggccgagtacgaggcggagaaaaagggtctgtct
atgcgtgtgaaccatggagcgtacggaggacagatggacatgggaggagctaacagcttc
ttccccttcaacgttgccgcactggcctctatgtccaacccccagctggaggagttgatc
aaccagggccgtcaaaaggtgatggaggccaccaacgctctcaagttcctccccagagaa
tctctagaggacaccatcgggagagtgtggagggagaacccagccctaacggagtcccag
gtccacgccatggctctggggagacaggccagtgtagagatggagctcaaacatagagaa
gctgtctacagagacgtcctcaataagcaacagactctgatgatgtacgttcagaaggtg
atcaccaacaggaaggtgagagagcagcagatcgccatggccaaccaggcccagctgatg
agccagatgaacggcatgctgggagctggagggatgagccagatggaactcttggggttg
taccaacagctgggggcgctacagggtcatcccacccacccctccatgggcggcaagaac
cccggcccctccaagggcaacctgtaa
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integrated database retrieval system