Salvelinus namaycush (lake trout): 120062222
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Entry
120062222 CDS
T07522
Name
(RefSeq) regulator of nonsense transcripts 3B-like
KO
K14328
regulator of nonsense transcripts 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120062222
03015 mRNA surveillance pathway
120062222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120062222
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
120062222
mRNA cycle factors
P-body specific factors
120062222
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smg4_UPF3
W02B3_4_N
RRM_1
Motif
Other DBs
NCBI-GeneID:
120062222
NCBI-ProteinID:
XP_038867962
UniProt:
A0A8U1H3P7
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Position
Sna17:complement(2457596..2462193)
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AA seq
448 aa
AA seq
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MKDGKENTRQREKRMEIKCENIEKTEKPKQEKKEVMTKIIIRRLPPSITKEELEEQLQPL
PEVDYLEFFSNDSSMYPHVFARAYINFKIPEDIVLFRDRFDGYVFVDNGGQEYPAIVEFA
PFQKIAKRRSKKKDAKSGTIDEDADYKKFLEIYNGDDEKFTSTPETLLEEIEAKTKELVA
KKMTPLLDFLKNKQRIREEKKEERRRRELERKRLRDEERRKWREEDRRKRKEAEKFKKGD
KPSENDKDQAKEVPKIKLLRKPDRGDDVEKLKKPEKDKMKDDRAPGCPDMTKRRNFETRE
DRVSRKADGNGHKDFRERDVERDRNRERDKERERRQKEKERIRRLDDDRRRRRERHDGEN
SYRKREEEEKREKRDRVWEKRRGENAGDSASHTDKPKKSEETLREEKAKRDCLRNKDRPA
IQLYQPGARNRGGETHAEARDQEKGVEG
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgaaagacggcaaggaaaatactcgtcagagggagaaaaggatggagataaaatgcgaa
aacattgaaaaaacggagaagccaaagcaggagaagaaagaagtaatgacgaagatcatt
atccgacgtctgcctccaagcataaccaaggaggaactggaggagcaattgcagccactt
ccagaagtggattacttagaatttttctccaatgacagcagcatgtacccccatgtcttc
gccagagcatacatcaacttcaagattccggaagatattgtacttttcagagaccggttt
gatggatatgtgttcgttgataatggagggcaggagtatccagccattgttgaatttgct
ccttttcaaaagattgccaaaagaaggagtaagaaaaaggatgctaaaagtggaacaata
gatgaagatgctgactacaagaaattcctggagatttataatggcgacgatgaaaagttt
acatccacccctgagactctactggaggaaatagaggctaaaacaaaggaactagtagct
aagaaaatgactccccttttggacttcttaaagaacaaacagagaatccgtgaggaaaag
aaagaggaaaggaggagacgagaactcgaacgtaagcgcctgagggacgaggaacgtcgg
aagtggagggaggaggacaggagaaagcgcaaagaagcagagaagttcaagaaaggagac
aaaccttccgagaatgataaagaccaagcgaaggaggtgccaaaaatcaagctcttgaga
aaaccagacagaggagatgatgtggagaagttaaagaaacctgagaaggacaagatgaaa
gacgacagagctccagggtgtcctgatatgacgaaacgccgaaacttcgaaaccagggag
gacagggtatcacggaaagctgatggaaatggacacaaagacttcagagagcgtgacgta
gaaagggacagaaaccgcgaacgagacaaggagagggagcggcggcagaaagagaaggag
cgcatcagacgactagacgatgatcgacgaaggaggagggaaaggcacgatggagagaac
tcctacagaaagcgagaggaagaagagaaaagggagaaaagagatcgtgtctgggaaaag
agaaggggcgagaatgccggggattctgcaagccatactgataagcctaaaaagtcagaa
gaaaccctgagggaggagaaagctaaaagagattgtttaagaaacaaggatcggcctgcc
attcagctataccagccaggtgccaggaaccgaggaggagaaactcatgctgaggcgcga
gaccaagagaagggagttgaaggataa
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