Salvelinus namaycush (lake trout): 120062226
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Entry
120062226 CDS
T07522
Symbol
cul4b
Name
(RefSeq) cullin-4B isoform X1
KO
K10609
cullin 4
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03420
Nucleotide excision repair
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120062226 (cul4b)
09124 Replication and repair
03420 Nucleotide excision repair
120062226 (cul4b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120062226 (cul4b)
03400 DNA repair and recombination proteins [BR:
snh03400
]
120062226 (cul4b)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120062226 (cul4b)
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Cullin
120062226 (cul4b)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
120062226 (cul4b)
TCR (transcription coupled repair) factors
Cul4-CSA complex
120062226 (cul4b)
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120062226 (cul4b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
SecA_SW
DUF3292
PG_binding_4
Motif
Other DBs
NCBI-GeneID:
120062226
NCBI-ProteinID:
XP_038867966
UniProt:
A0A8U1F1M5
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All DBs
Position
Sna17:complement(2566438..2582106)
Genome browser
AA seq
852 aa
AA seq
DB search
MESHVEGLPSPNPPPPTQEGRPTASDVNNDSSSITNSKKRKINRSEREDIDSISSSPKTH
SSSSSSTSQQIQKKLRFGDSVDFIGLDVKMAEESSSASCSNNTKTVFLAGVVGHHANGLT
KTAGSTTFSNSKPGAAKKLVIKNFKEKPKLPENYTHETWQKLKEAVEAIQNSTSIKYNLE
ELYQAVENLCSHKISARLYKQLRVVCEDHIKAQIDQFREDVLDSTLFLKKIDNCWQDHCR
QMIMIRGIFLFLDRTYVLQNSMLPSIWDMGLELFRFYIISDLKVQSKTIYGILLLIERER
SGETIDRSLLRSLLSMLSDLQIYQDSFEQRFLEETNRLYAAEGQRLMQEREVPEYLHHVN
KRLEEEADRVITYLDQSTQKPLIATVEKQLLGEHLTSTLQKGLNHLLDENRIQDLCLLYQ
LFSRVRGGVLVLLQHWIEYIKAFGSTIVINPEKDKTMVQELLDFKDKVDHIIDICFIKNE
KFVNAMKEAFETFINKRPNKPAELIAKHVDSKLRAGNKEATDEELEKMLDKIMIIFRFIY
GKDVFEAFYKKDLAKRLLVGKSASVDAEKSMLSKLKHECGAAFTSKLEGMFKDMELSKDI
MVQFKQCQNIPGNIELTVNILTMGYWPTYIPMEVHLPAEMVRLQEIFKTFYLGKHSGRKL
QWQSTLGHCVLKAEFKEGKKELQVSLFQTLVLLMFNEGEELTLEEIKLATGIEDGELRRT
LQSLACGKARVIHKVPKSKDVEDGDKFSCNDDFKHKLFRIKINQIQMKETVEEQASTTER
VYQDRQYQIDAAIVRIMKMRKTLSHNLLVSEVYNQLKFPVKPADLKKRIESLIDRDYMER
DKENPNQYNYVA
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atggaatcgcatgtagaaggtttaccttcccctaatcccccaccgccaacccaagagggt
agaccaacagcttcagatgtaaataacgacagcagtagtatcacgaattcgaagaagagg
aaaataaaccgttctgagagggaagacattgattcaatatcgtcatcccctaaaacccac
agttcctcttcgtcctccacttcgcaacaaatccagaagaagttgaggttcggagattca
gtagatttcataggactggatgtgaaaatggctgaggagtcgtcatctgcatcgtgttct
aacaacacgaaaacagtttttttggctggggttgttgggcatcatgcaaacggactgacg
aaaactgcaggctccactaccttctccaacagcaaacctggagctgcaaagaaactagta
atcaagaactttaaagaaaaacccaaattgccagagaactacacacacgagacctggcaa
aaactaaaggaggcggtcgaggccattcaaaacagcacttcaatcaagtacaatcttgag
gaactctaccaggctgtcgagaacctctgctcccataagatatctgccaggctctacaaa
cagctgcgggtggtttgtgaagaccacatcaaggcacaaatcgatcaattcagagaggat
gtactggacagtaccctcttcctgaagaaaatagacaactgttggcaagatcactgtaga
caaatgatcatgattagaggtatatttttgttcttggatcgcacctatgttttacaaaac
tcaatgctcccatcaatctgggacatgggcctagagttgtttaggttttacataattagc
gacctgaaggtccagagcaagaccatctacggcatcctgctgctcatcgagagggagcgc
agcggcgagaccatcgaccgcagcctgctccggagcctactgagcatgctctctgacctg
cagatttatcaggactcctttgagcagcgctttctggaggagactaatcggctgtatgct
gctgagggacagagactgatgcaggagagagaggtcccagagtatctccatcacgtcaac
aaacgcttagaggaggaagcggacagagtcatcacgtatctagaccagagcacacaaaaa
cctctcattgccactgtggagaagcaactactgggtgaacatctcacttcaactctgcag
aaaggcttgaatcacctgctagatgagaacagaatccaggacttgtgtcttctctatcag
cttttcagtcgcgtgagagggggcgtgctagtcctcctacagcattggatcgagtacatc
aaggcctttggaagtacgatcgtcattaaccctgagaaggacaagaccatggtacaggag
ctcctggacttcaaggacaaggtggaccacatcatcgacatctgcttcataaagaacgag
aagtttgtcaatgccatgaaggaggcttttgagaccttcatcaacaagagaccaaacaaa
cctgctgagctcatagcaaaacacgtggattcaaagcttagggcgggtaacaaggaggcg
acggacgaggagctggagaagatgttggacaagatcatgatcatcttccgattcatttat
ggcaaagatgtttttgaggccttctacaagaaagatctggccaagaggttgctggtggga
aagagtgcctccgtggatgccgagaagtccatgctgtcgaaactgaaacatgaatgtgga
gcagcattcaccagcaagctggaaggcatgttcaaggacatggagctttccaaggacatc
atggtgcagttcaaacagtgtcaaaacatccctggtaacattgagctgacggtgaacatc
ctcaccatgggatactggcccacctacatcccaatggaggtccatctgcccgcagagatg
gtgcgactgcaggagattttcaagacattttacctgggcaagcacagcggcaggaagcta
cagtggcagtcgacgttaggccattgtgttttaaaagctgaatttaaagagggcaaaaaa
gagcttcaagtgtccctgtttcagacgctagtgctgctcatgttcaacgaaggagaggaa
ctcaccttggaggagatcaagctagctacaggaatagaggacggcgagctgcgacggacc
ctgcagtcgttggcgtgtggcaaggcacgggtcatccacaaagtccccaagagcaaagac
gtggaggacggagacaagttctcctgcaacgatgacttcaaacacaaactcttcaggatc
aagatcaaccagatccagatgaaagaaacggtggaagagcaagccagcaccacggaacga
gtctaccaggaccggcagtatcagatcgacgccgccatcgtccggatcatgaagatgagg
aagactctgagccataatctcttggtgtcggaagtgtacaaccaactcaagttccccgtc
aagcctgctgacctaaagaagagaatagagtctctcattgacagagattacatggagcgc
gacaaggagaaccccaaccaatacaactatgtggcttaa
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