Salvelinus namaycush (lake trout): 120062278
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Entry
120062278 CDS
T07522
Name
(RefSeq) elongator complex protein 1-like isoform X1
KO
K11373
elongator complex protein 1
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120062278
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
120062278
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
A-sol_ELP1
HB_ELP1
Beta-prop_ELP1_2nd
TPR_ELP1
Beta-prop_WDR19_1st
Beta-prop_EML_2
Beta-prop_NUP159_NUP214
Beta-prop_WDR35_TULP_N
TPR_GEMI5
B-prop_COPA_B_2nd
TPR_9
Motif
Other DBs
NCBI-GeneID:
120062278
NCBI-ProteinID:
XP_038868042
UniProt:
A0A8U1F1S0
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Position
Sna17:complement(10250966..10260936)
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AA seq
1322 aa
AA seq
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MRNLRLLKSLRCLKLQVPGTPQCFTVRTDTGTVLIASEYSVTELDTRAGQVVNEVSLTVE
RYLPEDGGGTVVGIQDLPDQESVCVATATGDVILYNLNTNQLECVGSVDSGLSAMSWSPD
QELVTLTTGQDTIIMMTKNFEPITEVGIHQDDFGAGKFITVGWGKKETQFHGSEGKHAAQ
RKIIEVQPAMSWDDRRPRVTWRGDGQLFAVSAVCPLTGARKVRVWNRECVLQSTSETVNG
LEQSLCWKPSGSLIAATQRHPNKHSVVFMEKNGLLHGDFTLPFGKEQVKVKELLWNSDST
VLAVWLEDMTPGEGGQVNTYIQLWTVGNYHWYLKQNLYFGSDPQRAPAYVSWDPERPLRL
HLVTRGWVSLNYDWGWSTDRSHGEDGHDNANVAVIDGDKVLVSTFRQCVVPPPMCAYDLQ
LPAPVNLVTFQRQRTNELAALTADGHISVYGQGTAELSEPAAGLGGFRSVTHAPQLKATY
RVAVDQEEPLALRLLLWLREDVFLGVGACTDGPSQSKMLILGPSEAQGPQPTLEIRSHVE
VEGHVISMCHSSKTGTVALQLEDGQIRKFLWDSLKPSVVEWQDSTGCRINFPDPCVQTAL
FTIEEEHLLGLTDRSHLFVGETEVASNVSSFVVYDDFLLLTTHSHTCRCFRLTTLTVKGL
QVALAADGGQNQNDQNDETLRRVERGSRIVTVVPQDTRLILQMPRGNLETIRHRALVLAQ
LRKWLDSHKFREAFECMRKLRINLNLIYDHNPKVFLESVETFLRQLDSINHINLFLTELK
EEDTTTTMYPCPVNTTGQSAPVACGKKVDIVCDALRCTMESMDQHKYCLSILTSHVKKTV
PELEVALQKVHELRVNPPSAANAVSAEEALKYLLFLVNVNELYEHSLGTYDFDLVLMVAE
KSQKDPKEYLPFLNMLKTLEPNYQRYTIDKHLKRYRKALHHLSKCGEEHFTEALNLVKDQ
RLYSEALGLYPTDSPQYKALSCAYAEYLVEQQQAEQAGLLLWRCGEATRALQAFVGSASW
RNALCVAEQIPLPSDQLALLARDLAEKLIELRRYTEAAILLERYAKDCEEAISALITGAV
WEEALRLVYLYNRQDIIETNLKPALLEACSSQTSYLEAQKAMFTRHKTRLSVVRELKEKA
RLELLDEDVPDCPEAELYSEASSVMTGSHAGSKYSHSNSRISSRSSKNRRKAERKKLSLK
EGTPLEDMALLHALAEIIHSVDKMREEVHSLLKALVLFQFDGQAGRLQHAYGEALQMIEV
ALPEVWQEGLQQTQAPITGPNSTANSIMASFQQPRTSATQDSETPPPPKMRNGVKWKLSI
LK
NT seq
3969 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaacttgaggttgctgaagagccttcgttgcttgaagctgcaagtcccgggcacg
ccgcaatgtttcactgttcggacggacacaggcaccgtgctcatcgcttcagaatactcc
gtcacagagttggacacacgagctggccaggtggtgaatgaggtgtcgttgacagttgag
cgctatcttccagaggatgggggtgggacagttgttggtatccaagacttaccagaccag
gagtctgtgtgtgtggctacagccactggggatgtcattctttacaatctgaacactaac
cagctggagtgtgtgggtagtgtggacagtggtctgtcagccatgagctggagcccggac
caggagctggtcactctcaccactggtcaggacaccattatcatgatgaccaaaaacttt
gaacccatcacggaggttgggatccatcaggatgactttggagcggggaagtttatcaca
gtgggctgggggaagaaagagacccagttccatggttcagagggcaagcacgctgcccag
aggaagattatagaggtgcagccggccatgtcgtgggacgaccgcaggccgagggtgact
tggagaggagacgggcagctcttcgctgtgagcgcagtttgccccctgactggcgccagg
aaggtcagagtgtggaacagagagtgtgtcttacagtcgacaagtgaaaccgtcaacggt
ctggagcagtcactgtgctggaaaccgtcaggtagtttgatagcggccacacagcgtcat
cctaacaagcacagtgtggtgtttatggagaagaacggcctcctgcacggcgacttcacc
ctgccctttggcaaagaacaggtcaaggtgaaggagctgctatggaacagtgactcgact
gtgttggctgtgtggctggaggacatgacaccgggagaggggggtcaagtcaacacatac
attcagctgtggacagtaggtaactaccactggtacctgaagcagaacctgtacttcggc
agcgacccccagagggcaccagcctacgtgagctgggatcctgagaggcccctgcggctg
cacctggtgacccgaggctgggtcagcctgaactacgactggggctggagcaccgaccgc
agccacggggaggacgggcatgacaatgccaacgtggccgtgatcgacggagacaaggtc
ctcgtatcaacgtttcgtcagtgtgtggtgcccccgcccatgtgtgcctacgaccttcag
cttcccgcccccgtcaacctggtgaccttccagcgccagaggaccaatgagctggcagcg
ctcacagccgacggacacatctctgtctacggccaaggtactgcggaactgagtgagcct
gcagccggattgggaggattccgatctgtcacacacgcccctcagctaaaggcaacctac
agggttgcggtggatcaggaggagcccctggctctgcgtctgctgctgtggctgagggag
gatgtgttcctgggggtgggggcctgtacagacgggccgtcccagtccaagatgctcatc
ctgggaccctcagaggcccagggaccccagccaaccctggagatcaggtcacatgtggag
gttgaaggtcacgtgatcagcatgtgtcacagctccaagacgggcacggtggcgctgcag
ctggaggacggccagatcaggaagttcctctgggactccctgaagcctagtgtggtggag
tggcaggactcaacaggctgcagaatcaacttcccagatccctgtgtgcagacggccctg
tttaccatagaagaggagcatctgttaggccttacggaccgatctcacctgtttgttggt
gagacagaggtggcctccaacgtttcctccttcgtggtctacgacgacttcctgctgctc
accacacactcgcacacttgccgctgcttccgactcaccacgctcactgtcaaagggctg
caggtggccttggctgccgacggaggtcagaatcagaatgaccagaatgacgagactctc
cgcagggtagagaggggctccagaatcgtcactgtggtcccccaggacaccaggctcatc
ctacagatgcctcgcggtaacttggagaccatccgccatcgagcactggttttggctcag
ctccgaaagtggctggacagtcataagttccgagaggcctttgagtgcatgaggaagctg
cggatcaacctcaacctgatctacgaccacaaccccaaggtgtttttagagagcgtggag
actttcctgagacagctggactctatcaatcacatcaacctgttcctcacagagctcaag
gaggaagataccactacaacaatgtacccttgtccagtgaacactacaggacagtcagcc
cctgtggcttgtgggaaaaaggtggatattgtgtgtgatgcgttgcgctgcaccatggaa
tctatggaccagcacaagtactgtctgtctattttgacgtcacatgtgaagaagactgtt
cctgagctggaggttgccctgcagaaagtccacgagcttcgagtgaacccacccagtgct
gccaacgcagtgagtgcggaggaggctctgaagtacctgctgttcttggtcaatgtcaac
gagctgtatgaacactctctgggcacctacgactttgacttagtcctcatggtggccgag
aagtcccaaaaggaccccaaagagtaccttcccttcctgaacatgctgaagactctagag
cccaactaccagcgctacaccatcgacaaacacctcaagagatacaggaaggccttgcat
cacctcagcaagtgtggtgaggagcacttcaccgaggccctgaatctggtgaaggaccag
aggctgtatagtgaagccctggggctctacccaacagacagccctcagtacaaggcgctg
agctgtgcctacgccgagtacctggtggagcagcagcaggcggagcaggcagggttgttg
ctgtggcgctgcggcgaggcgacccgcgccctccaggcctttgtgggcagtgccagctgg
aggaacgccctctgtgtggcagagcagatccccctgccatccgaccagctggcactgctg
gccagggacctggcagagaaactgatagagctcagaagatatacggaggcggccatattg
ttggagcggtatgccaaggactgtgaggaggccatctcagctctgatcacaggtgcagtc
tgggaagaagcacttcgattggtgtatttgtacaacagacaagacatcattgaaacgaac
ctcaaaccagctctcttggaagcatgtagttctcagacctcttacctggaagctcagaag
gcgatgttcactcgtcacaaaacccgtctgtccgtggtacgggagcttaaggaaaaagcc
aggctggagttactggatgaggatgtcccagactgtccggaggcagagctctactcagag
gccagtagtgtgatgacaggcagccatgccggctccaagtactcgcatagtaactcccgc
atctcctcgaggtcgtctaagaaccgccggaaggccgagcgcaagaagctgagtctgaag
gaagggacccccctagaggacatggccctgctgcatgccctggcagagatcatccactct
gtggacaagatgagagaagaggtgcacagcctgctgaaggccctggtgctgttccagttt
gacggacaggcggggaggttgcaacatgcatatggggaggctctccaaatgatagaggtg
gcccttcccgaggtgtggcaggagggtcttcagcagacccaggcaccgatcacaggtcct
aactccacagccaacagcatcatggcttcatttcaacagccaagaacctcagcaacccaa
gattcagagaccccaccacccccaaaaatgagaaacggtgtcaagtggaagctgagtatt
ctgaagtag
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