Salvelinus namaycush (lake trout): 120062296
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Entry
120062296 CDS
T07522
Name
(RefSeq) syntaxin-3-like isoform X1
KO
K08486
syntaxin 1B/2/3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
120062296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120062296
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120062296
Membrane trafficking [BR:
snh04131
]
SNARE
Syntaxin (Qa)
Stx-PM
120062296
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
120062296
Exosomal proteins of other body fluids (saliva and urine)
120062296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
Syntaxin_2
ETRAMP
EspB_PE
PI_PP_C
DUF6827
DUF6480
ArAE_1_C
DUF6584
Motif
Other DBs
NCBI-GeneID:
120062296
NCBI-ProteinID:
XP_038868076
UniProt:
A0A8U1F1I8
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All DBs
Position
Sna17:11131673..11157152
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AA seq
290 aa
AA seq
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MKDRLEQLKATCDNDDEEVEIAIDNAAFMDDFFSQIEDIRISIDKVDENVSQVKKLYSVI
LSAPTSDQKTQDDLEAVTNNIKKMANNARNKLKTIERDLASEEEERISADMRIRKSQHAV
LSRKFVEVMTKYNEAQVDFRERSKGRIRRQLEITGKATTDEELEEMLEGGNSAVFTSGIL
DSGISKQALSEIEARHKDIVRLESSIKELHDMFVDIAMLVESQGDIVNNIEVQVSKAVDH
IVVAKTETKKAIQYQNKARKKKVIILAILIIVLAIVALIIGLSVGLNKKQ
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgattggaacaacttaaagcaacatgtgacaatgacgatgaggaagtggaa
attgctatcgacaatgcagcttttatggatgactttttctctcagatcgaggacatcagg
atcagcattgataaggttgatgagaatgtgtctcaagtcaagaagctctactcggtcatc
ttgtctgcccccacatcagaccagaaaacacaggatgacttggaggctgtcaccaacaac
atcaagaagatggctaacaacgcccggaacaaactcaaaaccatcgagagggatctggcg
tctgaggaagaggagaggatttcagccgacatgcggatacgcaaatcacagcatgcagtg
ctgtccaggaagtttgtggaagtgatgaccaagtacaatgaggcccaggtggacttcagg
gagaggagtaaaggacgcatccggagacagctagagatcactggaaaagccacgacagat
gaggagctggaggagatgttagaggggggaaactctgctgtcttcacttcagggatcttg
gactctgggatctcgaagcaggctctcagtgagatcgaggcgcgacacaaagacattgtg
cgtctggagagcagcatcaaagagctgcatgacatgttcgtagacatcgccatgctggtg
gagagccagggtgacatagtgaacaatatagaggtgcaagtgtctaaagctgtggaccac
atagtagtggctaagactgagactaagaaagccatccagtaccagaacaaagcacgcaag
aaaaaggtgatcatattggcgattctgattatcgtgctcgccatagtggctctgattatt
gggttgtcggtgggattgaataagaagcagtga
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