Salvelinus namaycush (lake trout): 120062301
Help
Entry
120062301 CDS
T07522
Name
(RefSeq) zinc finger CCHC domain-containing protein 7-like isoform X1
KO
K12597
protein AIR1/2
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
120062301
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120062301
03016 Transfer RNA biogenesis [BR:
snh03016
]
120062301
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
120062301
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
120062301
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCHC
Motif
Other DBs
NCBI-GeneID:
120062301
NCBI-ProteinID:
XP_038868083
UniProt:
A0A8U1F1K1
LinkDB
All DBs
Position
Sna17:11200102..11206392
Genome browser
AA seq
488 aa
AA seq
DB search
MMMGHQNDEEEGGNKDNRFYIEASSSSEGELGFSQYKQSSSPRAPQATGGNSPLVLAFPL
SSGRALRDVSPLDSSPSPTSRRSLHSERDLDLEYDDEPLEEWMILGGEEQEGDRYIQLNL
GCWSSSSESPSGTEDEELNAKYALKHNWAIIEKDKPRPYRYFTSDRSLTCHNCNKTGHLA
KGCTTPRRRPTCVLCGLQGHVQRACPGRHCHSCGLPSHGYHPCPEPPFWNQHCHRCGMAG
HLSDACPDTWRQFHFTTQQEVPLRPHVDHTHKHYRHTAHCYNCSRRGHLGHECTQRRMVS
GTFASLPYVCHYDNKKDIVKLNTRIHRKARELQEEGFMPLLERQRTYVTPGGSSEEERPS
PAPGRKRSLEGRRKTWPERRRERREVKKLRREAQARRAVGTTKWGSDEVVYTRDHFKNPH
REPIPPPQKKRRREERRESRSEERSRKNRESERWKKRGGLKRGYLYPRDDLGPMYDHLLS
PKNRVRIS
NT seq
1467 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgggccaccagaatgatgaggaagagggtggtaataaagacaacagattctac
atcgaggcctccagcagctcagaaggtgagctggggtttagtcagtacaaacagtccagc
tcaccgagagctccccaggccactggaggaaactctcccctagttcttgccttccctctc
tcgtctggccgagctctacgggacgtgtcgccactggacagcagcccaagcccaacctcc
aggcgaagcctccactcagagcgggacctggacctggagtatgatgacgaacccctagag
gagtggatgatcctgggaggagaggagcaggagggagacaggtacatccagctcaacctg
gggtgctggagcagcagttcagagtcgccttctggaacagaggatgaagaactgaatgca
aaatatgctctcaaacacaactgggccataatagagaaggacaagccacgcccataccgc
tatttcacctctgaccggagcctcacctgtcacaactgcaacaagactggacacctggcc
aagggctgtaccaccccgaggaggcgacccacctgtgtgttgtgtgggctccagggccat
gtccagagggcctgtccaggccggcactgccacagctgtgggctcccctcacacgggtac
catccctgccctgaaccccctttctggaaccagcactgccaccgctgtgggatggctggc
cacctatcagacgcttgtccggatacatggagacaattccacttcacaactcagcaggag
gttcccctcaggccacacgttgaccacacccacaaacactacagacacaccgctcactgc
tacaactgctccaggagaggacacctcggccatgagtgtactcagaggaggatggtcagt
gggacgtttgcctcgctcccctacgtctgtcactacgacaacaagaaggacatcgtcaaa
ctgaacaccaggatacacagaaaagccagagagctacaggaggagggcttcatgcctctg
ttagagcgccagaggacctacgtgacaccagggggcagtagtgaagaggagcggccctcc
ccagctccagggaggaagagaagcctggagggcaggaggaagacgtggccggagagacgc
agggagagacgggaggtgaagaagctgaggagagaggcccaagccaggagagcggttggg
acgaccaaatggggctcagacgaggttgtttacaccagggaccactttaagaacccccac
agagaacccatacctccccctcagaagaagagacgccgtgaggaaaggagggagagcagg
agtgaggagaggagtaggaagaatagagaatcagagaggtggaagaagagaggagggctg
aagcgtgggtacctgtacccccgtgatgacttgggacccatgtatgatcacctcctctcc
cccaaaaatagggtgcggatttcataa
DBGET
integrated database retrieval system
