Salvelinus namaycush (lake trout): 120062317
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Entry
120062317 CDS
T07522
Name
(RefSeq) histidine--tRNA ligase isoform X1
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
120062317
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
snh01007
]
120062317
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
snh03016
]
120062317
Enzymes [BR:
snh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
120062317
Amino acid related enzymes [BR:
snh01007
]
Aminoacyl-tRNA synthetase
Class II (A)
120062317
Transfer RNA biogenesis [BR:
snh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
120062317
Prokaryotic type
120062317
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
HGTP_anticodon2
tRNA-synt_2
WHEP-TRS
tRNA-synt_2d
Motif
Other DBs
NCBI-GeneID:
120062317
NCBI-ProteinID:
XP_038868119
UniProt:
A0A8U1F272
LinkDB
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Position
Sna17:13255230..13260551
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AA seq
523 aa
AA seq
DB search
MINLGMASLRLCAGLAGRRSGFCARSLRTLSGMTVSQIDEEVAKLLELKAQLGGDEGRHQ
FTLKTAKGTRDYNPKQMAIREKVFNTIISCFKRHGAENIDTPVFELKETLTGKYGEDSKL
IYDLKDQGGELLSLRYDLTVPFARYLAMNKVTNIKRYHIAKVYRRDNPAMTRGRYREFYQ
CDFDIAGQYDPMIPDAECLKIVHEILSELELGDFRIKVNDRRILDGMFAVCGVPDDKFRT
ICSTVDKLDKMSWEDVRSEMVKEKGLSEEAADQIGQYVSLQGGMDLAERLLQDAKMSQSK
QACAGLTDMKQLFSYLQLFQVTDKVVFDLSLARGLDYYTGVIYEAILTQTGPVPVAGAQN
GAGEKAEEGVSVGSVAGGGRYDGLVGMFDPKGRKVPCVGVSIGIERVFSIMEQKAEASAE
KVRTTETQVMVASAQKNLLEERLRLTAELWNAGIKAEVMYKKNPKLLSQLQHCEDSGIPL
VAILGEQELKDGVVKLRTVHSREEIDVSRAELVEEIKRRTSVV
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgattaacctgggtatggcgtccctgcgtctttgtgcggggttggcgggccgtcggtct
ggattttgtgcccgctctctacgcaccctctctgggatgactgtgtctcagattgatgaa
gaagtggccaaactgctagagctgaaggctcagcttggaggagatgaaggcagacaccaa
ttcacgctcaagaccgcaaagggaaccagggactataaccctaagcagatggccatcaga
gagaaagtcttcaacaccatcatcagctgttttaaacgccatggagccgagaacatcgac
acacccgtctttgagctgaaggaaacgttgacaggaaagtatggtgaggattctaagctc
atctacgacctgaaggaccaaggaggagagctgctgtcccttagatatgatctcactgtg
cctttcgcccgttacctggccatgaacaaggtcaccaacatcaagcgctaccacattgcc
aaggtctatcgccgtgacaaccccgccatgacccgcggccgctacagggagttctatcag
tgtgattttgacattgcaggccagtacgaccccatgatcccagacgctgagtgcctgaag
atcgtccacgagatcctgagtgagctggagctgggagacttccgcatcaaggttaacgac
agacgtattctagacggaatgtttgcagtgtgtggagttccggatgacaagttccgcacc
atctgctccacagtggacaaactggacaagatgtcttgggaggatgtgaggagtgaaatg
gtgaaggagaagggtctgtctgaggaagcagccgatcagattggacagtatgtcagcttg
cagggggggatggacctagctgagcgcctgctgcaggatgctaagatgtcacagagcaag
caggcgtgtgccggcctcacagacatgaagcagctcttcagctacctgcagctcttccag
gttacagacaaggtggtgtttgacctgagtctggcccgtgggttggactactacacaggt
gtgatttatgaggccattctgacccagaccggcccggtcccagtggcgggagcccagaac
ggggcgggcgagaaggctgaggaaggtgtgagcgtgggcagcgtggcgggcggcgggcgc
tacgacggcctggtgggcatgttcgaccccaagggcaggaaggtgccgtgtgtgggggtc
agcatcggcatcgagagggtcttctccatcatggagcagaaggctgaggcatcggcggag
aaggtgcgaaccacagagactcaagtcatggtggcctcggcacagaaaaaccttctggag
gagagactccgactgaccgctgaactgtggaacgctgggatcaaggcagaggtgatgtat
aagaagaaccccaagctgctgagccagctgcagcactgtgaggactctgggatccccctg
gtggcgatcctaggggagcaggagctcaaggacggggtggtgaagctccgaacggtccac
agccgagaggagattgacgtgtccagagctgaactagtggaggagatcaagagaaggacc
tcagtcgtctaa
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