Salvelinus namaycush (lake trout): 120062367
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Entry
120062367 CDS
T07522
Name
(RefSeq) nuclear factor NF-kappa-B p105 subunit-like isoform X1
KO
K02580
nuclear factor NF-kappa-B p105 subunit
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04010
MAPK signaling pathway
snh04210
Apoptosis
snh04218
Cellular senescence
snh04519
Cadherin signaling
snh04620
Toll-like receptor signaling pathway
snh04621
NOD-like receptor signaling pathway
snh04622
RIG-I-like receptor signaling pathway
snh04623
Cytosolic DNA-sensing pathway
snh04625
C-type lectin receptor signaling pathway
snh04920
Adipocytokine signaling pathway
snh05132
Salmonella infection
snh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
120062367
09133 Signaling molecules and interaction
04519 Cadherin signaling
120062367
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
120062367
04218 Cellular senescence
120062367
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
120062367
04621 NOD-like receptor signaling pathway
120062367
04622 RIG-I-like receptor signaling pathway
120062367
04623 Cytosolic DNA-sensing pathway
120062367
04625 C-type lectin receptor signaling pathway
120062367
09152 Endocrine system
04920 Adipocytokine signaling pathway
120062367
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
120062367
09171 Infectious disease: bacterial
05132 Salmonella infection
120062367
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120062367
Transcription factors [BR:
snh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Rel/Ankyrin
120062367
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RHD_DNA_bind
RHD_dimer
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Death
Motif
Other DBs
NCBI-GeneID:
120062367
NCBI-ProteinID:
XP_038868216
UniProt:
A0A8U1H3A9
LinkDB
All DBs
Position
17:16756814..16779067
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AA seq
947 aa
AA seq
DB search
MQEINDIFNSDTMAEEEPYLPHQPYNFDIDPLWDPLNFPPMSHSNSLRTVTADGPYLQII
EQPKQRGFRFRYGCEGPSHGGLPGASSEKNRKSYPNIKICNYQGLARVVVQLVTNSKDAH
LHAHSLVGKQCDKGICIADLQPKDSSISFPNLGILHVTKKNVSKTLEDRMSEAYRMGYNC
GIVIHPEMDAFQGEFRIPRELTDHQRNLISSAASYQAKEMDLSVVRLMFTAFLPDSDGGF
SRRLDPVISDPIFDSKAPNASNLKIVRMDRTAGCVTGGEEVYLLCDKVQKDDIQVRFYED
DETGLTWEAFGDFSPTDVHRQFAIVFKTPKYRDLNLQKPTSVFVQLKRKSDNETSEPKPF
TYHPQIIDKEEVQRKRQKTLPNFQDYSGHGGAGGLYRGPGGGGPATGGGGGFFQGYSTYN
NYGTSYSSGFSPGMSGGGAGIKHAPQGRAEDSGDDSDMDDDPASGAVVGVRAKSEDASAG
ETSEERGAGVELGPGDRTGECVLEARLVDVAERQVEALFQYAVTGDVSYLLAPQRQLMTA
QDENGDTGLHLGVIHSQTDAVRSLAQVLSALPGEEVLNMRNNLYQNPIFVPLYQTPLHLA
VITQQKAVAEALLLAGADVTLSDRHGNTALHLAAQQKEGGMVGFLLKRREMVELVDLPNA
AGLCSLHLAVLANSLCSLRDLLVSGGSVEVQERSCGRTALHLATELDNVSLAGCLLLEGD
ANVDCCTYNGSSPLHTATGRGSVKLTALLMAAGADPHKENFEPLFFREHDCCVDEEEEDE
GYIPGTTPLNMAATPEVLEILNGKEYKPEINTSVFVPPQGDMQSLGSDTKRALCQALECP
EGGWESLAHILGLGILNSAFRLSSSPASTLLDSYEVSGGKVKDLLEGLRTVGNCSALTVL
EGALCETEQAPPATQSTTKLLERVCDLKLDGWEDSGVCDSGVELSTA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
atgcaggaaatcaatgacatctttaattccgacaccatggcagaagaggagccttaccta
cctcaccaaccgtacaactttgacatagatccactatgggatcctctgaatttccctccc
atgtcacactccaactcactccggacagttacagcagatggaccctacctccaaatcatt
gaacagcctaaacagcggggcttcaggtttcgttatggctgtgagggaccttctcacggc
gggctaccaggggcctctagtgagaagaacagaaagtcctatcccaatattaagatctgt
aactaccaggggttggcacgtgtggtggtacagctggtgaccaactctaaagatgcccac
ctccatgcccacagtctggtgggcaagcagtgtgacaagggcatctgcatcgcagaccta
cagcccaaagactccagcatcagtttccccaacttgggcatcctccacgtgaccaagaag
aacgtgagtaagacactggaggaccgtatgtctgaggcctacaggatgggctacaactgt
ggtatcgtcatccatcccgagatggacgccttccagggagagttccgcatcccccgagag
ctcactgatcaccagagaaacctgatcagcagcgcagcgtcctaccaggctaaagagatg
gatctgagtgtggtgcgcctcatgttcacagccttcctcccagacagtgacgggggcttc
tcccgtagactggaccccgtcatatcagaccccatcttcgacagcaaagctccaaatgcg
tctaacctgaagatagtgcggatggaccgaacagctggctgtgtgacaggaggagaggag
gtctacctgctctgtgacaaggttcagaaagatgacatccaggtgcgcttctatgaggat
gacgagacggggctgacatgggaggcctttggggacttctcccccaccgatgtccaccga
cagtttgccattgttttcaagacccccaaatacagagacctgaacctccagaaacccacc
tcggtgtttgtgcagctgaagcgtaaatcggacaatgagacgagcgagcccaagcccttc
acctaccacccgcagatcatagataaggaagaggttcagaggaagagacagaagaccctg
cctaacttccaggactacagcggccacggtggagcagggggcctgtaccggggaccaggg
ggggggggtcccgctacagggggaggaggaggtttcttccagggctattccacctacaat
aattacggcaccagctacagctctggcttttcccctggcatgagtggtggcggggcggga
attaaacatgctccacagggcagagcggaggacagtggtgatgacagcgacatggatgat
gacccggcctcgggggcagtggtgggggtccgagccaagtcagaggacgcctctgctggg
gagacgagtgaggagagaggggccggtgtggagctaggaccaggggacaggactggagag
tgtgtgctggaggccaggctggtggatgttgctgagaggcaggttgaagccctcttccag
tacgccgtcactggtgacgtcagctacctgctggctccacagcgccagctcatgactgct
caggacgagaacggtgacactggtctccatctgggagtgatccacagccagacagatgca
gtcaggagtctagcccaggtgctctctgccctgcctggagaggaggtcctcaacatgagg
aacaacctctaccagaaccccatatttgtccctctataccagactcctttgcacctagcg
gtgataacacagcagaaggcggtagctgaggccctcttattggctggggctgatgtcact
ctgtctgatcgccacggaaacacagctcttcacctggccgcccagcagaaggagggaggt
atggtgggatttctactgaaacgcagagagatggtggaactagtggacctccccaacgca
gcaggactgtgctccctccacctggctgtgctggccaacagcctgtgttccctcagggac
ctcctggtgagcgggggcagtgtggaggtccaggagaggagctgcggccgcacggcgctc
catctggccactgagctggacaacgtctccctggcaggctgcctgctactggagggggat
gctaatgtggactgctgcacctacaacggttccagccctctccatacagccacagggcgg
ggctctgtcaagctgaccgctctcctcatggctgcaggtgccgatcctcacaaagaaaac
tttgagcccctgttcttcagagagcatgactgctgtgtggatgaggaagaggaggatgaa
ggctacatcccagggacaactccgctcaacatggctgccactcctgaggtgttggaaatc
ctgaatggaaaagagtacaagccagagatcaacacctccgtcttcgtcccccctcaaggt
gacatgcagagcctgggctcagacacaaagcgggcactatgccaggccctggagtgcccg
gagggtggctgggagagcctggcacacatactgggcttgggcatcctcaacagcgccttc
agactcagctcctcccccgcaagcacgctgctggacagctacgaggtgtctggaggaaag
gtcaaggaccttttggagggactcaggactgtagggaactgctctgctttgacagtactg
gagggggcactgtgtgaaacagaacaggctccaccagctacccaaagcaccacaaaactc
ttagaacgtgtgtgtgatctgaagctggacggatgggaggacagcggagtgtgtgacagt
ggggtggagctctccacagcgtga
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