Salvelinus namaycush (lake trout): 120062477
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Entry
120062477 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain acyl-CoA synthetase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120062477
00071 Fatty acid degradation
120062477
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120062477
09143 Cell growth and death
04216 Ferroptosis
120062477
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120062477
03320 PPAR signaling pathway
120062477
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120062477
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120062477
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120062477
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA synthetase
Long/very long chain acyl-CoA synthetase
120062477
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120062477
Exosomal proteins of breast cancer cells
120062477
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120062477
NCBI-ProteinID:
XP_038868404
UniProt:
A0A8U1F2S3
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All DBs
Position
Sna17:complement(23511268..23525766)
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AA seq
697 aa
AA seq
DB search
MQAQQLLNQLRFPELDEVRQYLRSLSTHTLVGVGAFAALTTYWYTTRPKALKPPCDLRMQ
SVEVPGGEYARRSALMDSDKHMTHLYNDAKTMYEFFLRGARVSNNGPCLGARQPSQPYEW
LSYSEVAEKAENLGSALLHRGHTKTKDQFIGIFAQNRPEWTIAELACYTFSLVAVPLYDT
LGTEAIAYVIDKATISSILCDVPEKARLVLECVSGREHSVRTIILMEPFDDELVAKGKDC
GIDILSLSQVEAIGKAHHHQPVPPSPEDMAVVCFTSGTTGNPKGAMLTHGNVASNCSAFI
KVIEDHLILDHHDVHISYLPLAHMFERVVEGVILVHGGRIGFFQGDIRLLMDDLTTLRPT
VFPMVPRLLNRMFDKIYGQANNSLKRWVLDFAFKRKEAELLSGIIRRDSIWDKLIFRKVQ
ASLGGRVRLMITGAAPVSATVLTFLRAALGCQLYEGYGQTECTAGCTLTVPGDWTAGHVG
APLPCNSVKLVDVAEMNYLAANGEGEVCVKGVNVFLGYLKDPEKTEETIDANGWVHTGDI
GKWLPNGTLKIVDRKKHIFKLAQGEYIAPEKIENIYTRSDAVAQVFVHGDSLQACLVAII
VPDPDFLPGWAKKRGLEGSYGDLCNNMDVKKAILEDILKLGKDSGLKSFEQVKDITLFTE
MFSIQNGLLTPTLKAKRAELRNYFREQIDKLYSKIKM
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgcaagcccagcagctcctgaatcagctgcgcttccccgagctggatgaggtgcggcag
tacctgcgcagcctgtccacacacacgttggtgggtgtgggggcattcgctgctctcaca
acctactggtacaccacccggcccaaggccctgaagccaccatgcgacctgagaatgcag
tccgtcgaggttccgggaggagagtatgcccgccggtcagcgctgatggacagcgacaaa
cacatgacccacctgtacaacgacgccaagaccatgtatgagttcttcctcaggggcgca
cgggtctccaacaatggtccctgtcttggagcaagacaaccaagccagccctatgagtgg
ctgtcatactccgaggtagcagagaaggcagagaacctgggctcagcgctgctccacagg
ggacacactaaaaccaaagaccagttcattggcatctttgctcagaaccgaccagagtgg
accatcgctgagctggcctgctataccttctccctggtggctgtgcccctgtatgacact
ctgggcactgaggccatcgcctatgtcatcgacaaggccaccatttccagcatactgtgt
gacgtccctgagaaggccaggctggtcctggagtgcgtctctggcagggagcacagtgtc
agaaccatcatcctcatggagccctttgatgatgagctggtggccaaggggaaggactgt
ggcatcgacattctcagcctgagccaagtggaggctatcggcaaggcccaccaccaccaa
ccagttcctcccagtcctgaagacatggctgtcgtctgcttcaccagtggaaccacaggg
aacccaaagggagccatgctgacacatgggaatgttgcttccaactgctctgccttcatc
aaagtcattgaggatcacctcatattagaccaccacgatgttcatatatcctacctgccc
cttgctcatatgttcgagagggttgtagagggagtcattctggtgcatggggggaggatt
ggtttcttccagggagacatccgcctgctgatggatgacctcaccaccctgaggcctaca
gtgtttcctatggtgccacgcctcctcaacaggatgttcgacaagatctatgggcaggct
aacaactctctgaagaggtgggtgctggactttgcctttaaaaggaaagaggctgagctg
ctgagtggcatcattaggagggacagcatctgggacaaactcatctttaggaaagtgcag
gccagtctgggaggacgggtgcgtctgatgataacaggtgctgcccccgtgtctgccacg
gtgctgacgttcctgcgagccgcgctgggctgccaattgtatgaggggtatggacagact
gaatgcacagcgggctgcacactgacagtaccaggggattggacagcaggtcatgttgga
gcgcccctgccatgtaactcggtgaagctggtggatgtggctgagatgaactacctggct
gccaatggagagggagaggtgtgtgtgaaaggagttaacgtgtttctgggctacttgaaa
gaccccgagaagacggaggagaccattgatgctaacggctgggtccacacaggggacatt
ggcaagtggttaccgaacggaactttgaaaattgtggacaggaagaagcacatcttcaag
ctggcccagggagagtacattgcaccggagaagattgagaatatctacaccaggagtgac
gcagtggcacaggtctttgtgcacggggacagcctacaggcatgcctagtagccatcatt
gtgccagatcctgacttccttcctggctgggccaagaagagaggactggagggatcctac
ggagacctatgcaacaacatggatgtaaagaaggccatcttggaagacatcttgaaacta
ggaaaagacagtggtctgaaatcttttgagcaggtgaaggacatcaccctgttcacagag
atgttctctatccaaaatggacttctcactcccaccctgaaagccaagagagcagaactc
aggaactacttcagggagcagatcgacaaactgtactccaagatcaagatgtga
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