Salvelinus namaycush (lake trout): 120062491
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Entry
120062491 CDS
T07522
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A
KO
K23720
UV-stimulated scaffold protein A
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120062491 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
snh03400
]
120062491 (uvssa)
DNA repair and recombination proteins [BR:
snh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
120062491 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
INTS1_R4
DUF1195
LBD_receptor
Motif
Other DBs
NCBI-GeneID:
120062491
NCBI-ProteinID:
XP_038868429
UniProt:
A0A8U1F2M7
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Position
17:complement(23956371..23984143)
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AA seq
736 aa
AA seq
DB search
MEHAQRDKLSELVEELTTSGEPQLNPNKLKEVKKICKVSNDYIEHFYHLTMTQLAQEHAE
IRLSAFQMVSELFTRSHHFRVLLVDNFQEFLDLTVETDSDEPLPPPKEVARKLKTIAIKT
VQEWQATYGEAYKKLALGYHFLKQVKKVDFHDVQARTLAERKREEERQKRLERIYKDKVE
KATKEMEDASEEIEECLTEINNCMKLLLPVEFDFSDLDTSTPANNSTVSVSSVPNEKTST
SSDLDEQPCCSKDLELQREPKNPETSTATTTNEEKEEEDPSDEDSDMEDVLEEDAFIRNT
GLISHKYSLDLNLSTDLKLKETEENEAVVNTMKDLHKLLSTKHLPVVQYWVQVFTKAGVP
EPLLRRAIDLKSSLERALQKHEDLHIDYKARHRRVMKAPEGSNDDDDDFEEVPEKEGFEP
HIPDHLREEYGLEPSPSTSVASKKPVQPPVTCPATGASHTLSRPRKRATDEEQDPTCAAA
TLRLFKQRLLPQPPSTSSAAGGHVDPTYQASDPSEDRDKAPVIPFGLDLYYWGEEQPTAG
KIIKNSSQHQFWVPNEVEEEVENKELAAQMKSRYITFAGRFQPVKHRCKTPMPNGALCER
QDRVKCPFHGLIIPRDELGKPTNPEDVVRLEKEEWKRREDQPDWRDPELMRDIELATGED
LGSSKTFGKGKKGKGKGKKKKYPNLSDLKKGVNTSRSRLEKKVFNPSSMRRVTDVMNKMD
KLKHAKFANQFNYALN
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atggaacacgcacaacgagataagttgtcagagctcgtggaagagttgaccacatctggg
gaaccacaactaaatccaaataaactgaaggaagtgaaaaagatatgcaaagtttccaac
gactacattgagcacttctaccacctgaccatgacgcagctggcccaggagcatgccgag
atccgcctgtcagccttccagatggtcagtgaactcttcacacgctcacaccacttcagg
gtcctgctggtggacaacttccaggagtttctggacctgacagtggagacggactcagat
gagcctctgccaccacccaaagaggtggcccgaaagctgaagaccattgccatcaaaact
gtgcaagaatggcaggccacttacggagaagcctataagaaactggccttgggctaccac
tttctcaagcaggttaaaaaggtggactttcatgatgttcaggccagaacactagctgag
aggaaacgagaggaggagagacagaaaagactggagaggatttataaagacaaagttgaa
aaggccaccaaggaaatggaagatgcctcagaagagattgaagagtgtcttacagagata
aacaactgcatgaagttgcttctgcctgtagagtttgacttcagtgacctagatacctca
accccagccaataattcaaccgtttctgtctcttctgtgcctaatgagaagactagcacc
tccagtgacctagacgaacagccctgttgtagtaaagacctggagctccagagggaaccc
aagaatccagagacaagtacagcaacgacaaccaatgaggagaaggaggaagaggatcct
agtgatgaagacagcgatatggaggatgttctggaagaagatgcattcatacgcaacaca
ggactcatatctcacaaatacagcctggacctgaacctctccacagatttaaagttaaag
gagacagaggaaaatgaagcagtggtgaacaccatgaaggacctgcacaaactgctcagc
actaaacacctgcctgtcgtccagtactgggttcaggttttcaccaaggcgggtgtgcca
gaaccgctcctcagacgtgccatagacttgaagtcgtcattggagagagctctccagaaa
catgaagacctgcacattgactacaaggccaggcatcgcagagtgatgaaagcgccggag
ggcagcaatgacgacgatgatgactttgaggaggttccggagaaggagggttttgaaccc
cacattccagaccatctacgggaggagtacggtttagagccgtccccctctacctctgtg
gccagtaagaagccggtacagcctccagtgacgtgtcctgcaacaggagcctctcacacc
ctctccagacccaggaagagagccactgacgaggagcaggaccctacctgtgcagccgcc
acactccgcctcttcaagcagcgcctcctaccccagccacctagcaccagctctgcagca
ggaggtcatgtggaccccacataccaggctagtgaccccagtgaggacagggacaaagct
ccagtcatccccttcggtctggacctctactactggggagaggagcaacccactgcaggc
aaaatcatcaagaatagctcccagcaccagttctgggttcccaacgaggtagaggaagag
gtggagaataaggagctggctgcccagatgaagtccaggtacatcacgttcgctggccgc
ttccagcccgtcaagcacaggtgcaaaacccccatgcccaacggagccctctgtgaacgc
caggaccgagtcaagtgtcctttccatgggctgatcatcccacgagacgagctgggaaaa
cccaccaacccagaggacgttgtgcggctggagaaagaggagtggaaacgtagagaggac
cagcctgactggcgggaccctgagctgatgagggacatagagcttgccactggggaggac
ctggggtcctccaaaacctttgggaagggcaagaaaggcaaggggaagggcaagaagaag
aagtaccccaacctcagtgatctgaagaagggtgttaacacttcacgttccagactagag
aagaaggttttcaacccgagctccatgaggcgagtgacagacgtcatgaataaaatggac
aaattgaaacacgcaaagtttgcaaaccaatttaattatgcactgaattaa
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