Salvelinus namaycush (lake trout): 120062499
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Entry
120062499 CDS
T07522
Name
(RefSeq) synaptic functional regulator FMR1-like isoform X1
KO
K15516
fragile X mental retardation protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120062499
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
120062499
Factors involved in mRNA localization
Other mRNA localization factors
120062499
mRNA cycle factors
Stress granule specific factors
120062499
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
Tudor_FRX1
FXMR_C2
KH_1
Agenet
KH-I_KHDC4-BBP
DUF7636
Motif
Other DBs
NCBI-GeneID:
120062499
NCBI-ProteinID:
XP_038868440
UniProt:
A0A8U1H3W2
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Position
Sna17:25459079..25468259
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AA seq
587 aa
AA seq
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MDELAVEVRGTSGAFYKAYLKDVHESSVTVSFENNWQPERQIPFHDVRFPPPTGFQKEIN
ESDEVEVCAVYSRANDKEPCGWWLATVRMVKGEFYVIEYTACDATLNEIVTLERLRPVNP
NKPATKNSFLKIHLDVPEDLRQMCLKDSHKDFKKALGAFNVTYDSDKKQLVILSVNEVTS
KRVQMLSDMHFRSLRTKLSLMQRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHG
ANIQQARKVPGVTTIDLDEETCTFHIYGEDQEAVRKARSFLEFSEDVIKVPRNLVGKVIG
KNGKLIQEVVDKSGVVRVRIEAENNKKPPPLDEGMVPFVFVGTKESISNAKVLLDYHLNY
LKEVDQLRMERLQIDEQLRQIGGGGPRGGPGTGRPDNKTFIVDNGGLGMMGMGSQRGGKP
FVRGGGRGRRGGPSLASGTNSEASNASETESDHKDELSDWSLAPTDELTGGFPKRPDTRK
RGGPRGRGGRGRGGGFKVAEDIQWTESRSRNTRDPKLRPLEDSLQIRVDGNNERSVHAAA
RGPAGDGPGPGANRQRPIKERPIKKDNQESPGGEATAISLAMVNGVS
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggacgagctagcggttgaagtcagggggacgagtggagctttttacaaggcctatttg
aaggatgttcatgaaagttctgtcactgtctcctttgaaaacaattggcagccagaacgt
caaattcccttccatgatgttcgatttcctccacccacaggttttcagaaagagataaac
gagagtgatgaagttgaggtatgtgctgtttattctagggccaatgacaaagaaccatgt
ggctggtggctggcgacagttcggatggtgaagggtgagttttatgtcatagagtatacc
gcttgtgatgccacgctaaatgaaatagtcacattagagaggttacgacctgtgaatcca
aacaagccagctacaaaaaactccttcctgaaaattcatctggatgtcccagaggacttg
cggcaaatgtgtttaaaagactcgcataaagattttaagaaggctttgggagcattcaat
gtcacttatgactcagacaaaaagcagcttgttattctgtccgtgaatgaggttacatcc
aaaagggtgcagatgctgagcgacatgcatttccggagcctgcgcaccaagctgtcccta
atgcagaggaatgaggaggctagccgccaactggaaagctctcggcagctggcgtccagg
ttccatgaacagtttgtggtccgggatgatctgatggggctggccattgggacccacggt
gccaacatccagcaggccaggaaagtacctggggtcaccaccatagacctggatgaagag
acctgcaccttccacatctatggagaggaccaagaggctgtccgcaaggctaggagcttc
ttggagttttctgaagatgtcatcaaagtaccaaggaatttagtggggaaagtcattggg
aaaaatgggaagctgatccaagaagtggtggataaatctggtgttgttagagttcggatt
gaggcagagaacaacaagaagccacctccattggacgagggcatggtgccgtttgtcttt
gtggggacaaaggagagcatctccaatgctaaagtactgttggactatcatctcaactat
ctgaaggaagtggaccagctccgtatggagcgactgcagatagacgagcagctgaggcag
attggaggagggggccccagggggggcccagggactggacggcctgacaacaagaccttc
atcgtagacaacggcggcctggggatgatgggcatgggctcccagagaggagggaagcca
ttcgtcaggggaggaggccgtggccgacgcggtggtccctctttagcctcaggcaccaac
tctgaggcttccaatgcctctgagactgagtcggaccacaaggacgagctaagtgactgg
tctctggcccccactgatgagctgactgggggcttccccaaacgacccgatacacgcaag
agaggagggcctcgcgggcggggagggagaggaagaggaggaggcttcaaagtagctgaa
gacatccagtggactgagtcacgctcacggaataccagagaccctaagctgaggcctctg
gaagattctttgcagatcagagtggacggtaacaatgagaggagtgttcatgctgcagcc
agaggccccgcaggtgatggacccggccctggagccaaccgacagagacccataaaagag
cgacctatcaagaaggataaccaggaaagccctggtggtgaagccaccgccataagcctg
gcgatggtgaacggggtgtcatag
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