Salvelinus namaycush (lake trout): 120062511
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Entry
120062511 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
snh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120062511
04120 Ubiquitin mediated proteolysis
120062511
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120062511
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120062511
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120062511
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
zf-RING_5
zf-ANAPC11
zf_RING_Vps8_fungal
zf-RING-like
FAR1_N
zf-RING_Vps41
zf-HC5HC2H
FANCL_C
Motif
Other DBs
NCBI-GeneID:
120062511
NCBI-ProteinID:
XP_038868467
UniProt:
A0A8U1F279
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All DBs
Position
17:complement(29329183..29345567)
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AA seq
615 aa
AA seq
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MVRAALVTATSLALTGAVIAHAYLLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFLLGKF
MRKVFFGQLRAAEMEHLIERSWYAVTETCLAFTVFRDDFSPRFVGLFTLLLFIKCFHWLA
EDRVDFMERSPNISWIFHFRVLSLMVLLGVLDFLFVNHACHSIITRGASVQLVFGFEYAI
LMTMVLTTFIKYTLHTVDLQSDNPWDNKAVYMLYTELFTGFIKVVLYMAFMTIMIKVHTF
PLFAIRPMYLAMRQFKKAVTDAVMSRRAIRNMNTLYPDATPEDLLASDNVCIICREEMVT
GAKKLPCNHIFHASCLRSWFQRQQTCPTCRMDVLRASNPNQPPAPAPAQPPAPAAPANAP
VPGPPGNVGPGMMPHFPPGLFPFWGPFPGAAPPAGAPGATEAVGATEAAQTQGAGTTGAS
TVGAAPAPGGPMPGFPFPSFPPPPFPSAPWLTMPPPPFVSSMPPPPPALSTMSEAELREL
EQEGRRGLEARLQCLHNIHTLLDAAMLNIDQYLTTVATLTPPQSETSSAAGEASGSSPPS
TSAETQEKDSQSSTAAEPEAVNGATGFSQPDSTTLGDSEDQRDGEEVGEDGEPNPSELRR
RRLRKLETTPPPPDH
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtgcgtgcagccctggtgactgccaccagtctggctctgactggcgcagtgattgcc
catgcctacttgctcaaacaccagttctaccccactgtggtctacctcaccaagagtagc
cccagtatggcagtgttgtacatccaggcgtttgtgttggtgttcttgttgggaaagttc
atgcgtaaagtcttcttcggacagctgagagctgcagaaatggagcatctgatagagcga
tcctggtatgccgtcacagagacgtgtctggcctttaccgtgttcagagacgacttctct
ccccgcttcgtaggcctcttcaccctgctgctcttcatcaaatgcttccactggctggct
gaggacagggtggactttatggagagaagtcctaatatatcctggatcttccacttcagg
gtgctctctctgatggtgttgctgggagtcctggacttcctgtttgtcaaccatgcctgt
cacagtatcatcacacgaggggcctctgtccagctggtctttggatttgagtatgccatc
ctgatgacaatggtgctcaccaccttcatcaagtacaccctccacactgtcgacctccag
agtgacaacccctgggataacaaagcagtctacatgctctacaccgagctcttcactggt
ttcatcaaggtcgtcctgtacatggcgttcatgaccatcatgataaaggtgcacaccttc
cccctattcgccatccggcccatgtacctggcgatgaggcagttcaagaaagctgttacg
gatgctgtaatgtcgcggcgagccatccgcaacatgaatacactttacccagatgccact
cctgaagatctgctggcttcagacaacgtgtgtatcatctgtcgtgaagaaatggtgact
ggagccaagaaacttccttgcaaccatatcttccacgcaagttgccttcgttcctggttc
cagagacagcagacgtgtcctacatgtcgtatggatgtcctccgggcctctaaccccaac
cagcctcccgccccagcgcctgcccagcctcctgccccagcagcacctgccaacgcccct
gtccctggtccacctgggaacgttggccctggaatgatgccccacttccccccagggctg
tttcctttctggggccccttccctggagcggccccccctgctggtgccccaggggccaca
gaggcagtaggggccacagaggcagctcagactcagggagctggcaccactggggccagt
acagtcggtgctgctcctgctccaggaggccctatgcctgggttccccttcccctctttc
cctcccccaccgttcccctcagctccatggctgactatgccacctccaccgtttgtgtca
tccatgccccctcctcccccggccctgtccaccatgtcagaggctgagctgagggagctg
gagcaggagggccgtagaggcctggaggccagactgcagtgtctccacaacatccacact
ctactggacgctgccatgctcaacatcgaccaatacctcactaccgtcgccacgctcact
cctcctcagtcagaaaccagcagcgctgctggcgaggccagtggatcatctcctccctcc
actagtgcagaaacccaggagaaagactctcagagcagtacagccgctgaacctgaagct
gtgaatggggccacaggtttctcccagccagactctaccacgttgggcgacagtgaagac
cagagggatggagaggaagtcggggaagacggagagcccaacccttcagagctgaggcgc
cgtcgtctccgcaaactcgagaccacaccccctccacctgaccactaa
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