Salvelinus namaycush (lake trout): 120062532
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Entry
120062532 CDS
T07522
Name
(RefSeq) glucocorticoid receptor-like isoform X1
KO
K05771
glucocorticoid receptor
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120062532
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120062532
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
snh03310
]
120062532
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
120062532
Nuclear receptors [BR:
snh03310
]
3. Estrogen like
3C. 3-Ketosteroid receptor
120062532
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
GCR
Motif
Other DBs
NCBI-GeneID:
120062532
NCBI-ProteinID:
XP_038868505
UniProt:
A0A8U1F2C5
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Position
Sna17:complement(31187394..31260636)
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AA seq
803 aa
AA seq
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MDQGGVKKSRSSNDNSRVKLRLSETPSERNPLTDAPCSAMSVALATTTTPFLPSSQLMQP
GDVPSGLSNSPPPSGEDLASASVTASVGLYLEDPEPPTTKLLPQHTNTSLGLGLFTLGDT
YSRLEDSIADFHRSSPSMDSLIGGSDPNLFPMSMRSETDFSRDQDPMDMDQEGYIGKDQK
LFNDNTLDLLQDFELTGSPSDFYVGDDAFLSSLADDSLLGDESQDRGVSNSTSKPAATMT
NSGGFSGSNTTTLYGSNLLTCQDESNSSTPMTGNSPTPNTFPVVKLEKEAGFIQLCTPGV
IKQEKTSAIRSYSCRMSGSTGGSTSSSPSELSSASPISICGVSTSGGQSYHFGVNSSINT
PLASTTSGASPQKDQKPSVFSLYPPLVTVGEAWNNSSYGDGASGMQGLSSPTSSFSSSFA
SSTSRQGGGAASCTTQGKAGTAHKICLVCSDEASGCHYGVLTCGSCKVFFKRAVEGQHNY
LCAGRKDCIIDKIRRKNCPACRFRKCLMAGMNLEARKTKKLNRLKGVQQPTMAELTPRPL
PEARSLVPKSMPQLTPTMLSLLKAIEPDTIYSGYDGTLPDTSTRIMTTLNRLGGRQVVSA
VKWAKSLPGFRNLHLDDQMTLLQCSWLFLMSFGLGWRSYQQCDGNMLCFAPDLVINQDRM
KLPYMADQCEQMLKISSEFVRLQVSHDEYLCMKVLLLLSTVPKDGLKSQAVFDEIRMSYI
KELGKAIVKREENSSQNWQRFYQLTKLLDSMHEMVGGLLNFCFYTFVNKSLSVEFPEMLA
EIISNQLPKFKAGSVKPLLFHQK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggatcaaggaggagtgaagaagagcaggagtagcaacgacaacagcagagttaagctc
cgtctgagcgaaaccccctcagagagaaaccctctcactgacgctccctgcagtgccatg
tccgttgccttggcaaccaccaccaccccgttccttccatccagccagctgatgcaacca
ggtgacgtgcccagcggactcagtaacagcccccctccctcaggtgaggacctcgcctca
gcctccgtcacggcctccgtgggcctctacctggaagacccagagcctcccaccacaaag
ctcctgccccaacacactaacacgtccctgggccttggactcttcacccttggggatacc
tactcccgcctggaagacagcatcgctgacttccaccgctcctcacccagcatggactct
ctgatcgggggctcggaccctaacctgttccccatgtccatgaggtcggagacagacttc
tcccgggaccaggaccctatggatatggaccaggaagggtacattggaaaagaccagaaa
ctgttcaacgacaacactctggatctcctccaggactttgagctgacaggctccccatca
gacttttacgtaggggacgacgccttcctttcctccctggctgatgactctctcctgggg
gatgagagccaggatcgtggggtctccaactccacctccaagccagctgctactatgacc
aatagtggtggttttagcggttccaacaccaccacattgtatggtagcaatctactaaca
tgtcaggatgaatccaactccagcacccctatgacaggcaactccccgaccccaaacacc
ttccccgtggtgaagctcgagaaggaagctggtttcatccagctgtgtactccaggtgtg
atcaaacaggagaagacctcggccattcgtagctactcctgccggatgagtggtagtacc
ggcggctccacttcctcctccccctcagagctgtccagcgccagccccatctccatctgt
ggggtgagcacctctggaggacagagctaccactttggagtcaacagcagcatcaacacc
cccttggcttccactaccagtggagcttctccgcagaaggaccagaagccctctgtgttc
agcctgtatcctccgctggtgaccgtaggagaggcctggaacaacagtagctatggggac
ggagcttctggaatgcaaggtctctccagccctacctcctctttctccagcagctttgcc
agttctacctccaggcagggtggtggcgctgcgtcgtgtacaacccagggcaaggccggg
accgcccataagatctgtctggtgtgttcagatgaggcgtccggctgtcactacggggtg
ctcacctgcggaagctgcaaggtgttcttcaagagagccgtggaagggcagcacaactac
ctgtgtgctgggaggaaggactgcatcatcgataagatcagaaggaagaactgtccagcc
tgccgcttccgcaagtgtctcatggcagggatgaacctggaagctcgtaaaactaagaag
ctgaaccgtttaaagggtgtgcagcagcccaccatggccgagctgaccccccgtccgctc
ccagaggccaggtcgctggtccccaagtccatgccccagctcacccccaccatgctgtct
ctactaaaggccatcgagccagacaccatctactctggctacgacggcaccctgccagac
acctccacacgcatcatgaccaccctcaacaggctggggggacgacaggtggtatcagcc
gtcaagtgggccaagtctctgccagggttccggaaccttcacctggacgaccagatgact
ctgctgcagtgttcctggttgttcctcatgtccttcggcctgggctggaggtcctaccaa
cagtgtgacgggaacatgctctgcttcgctccagacctcgtcatcaatcaggaccgtatg
aagctgccctacatggcagaccagtgtgaacagatgttgaagatctccagtgagtttgtc
agactgcaggtgtctcatgacgagtatctgtgtatgaaggttctgctgctgctcagcacc
gtgccaaaggatggtctgaaaagtcaggcagtgtttgatgagatcaggatgtcctacatc
aaggagttggggaaggccatcgtcaagagggaggaaaactccagccagaactggcaacgc
ttctaccagctcactaagcttcttgactccatgcacgagatggttggtggcctgctgaac
ttctgcttctacacgttcgtcaacaagtctctgtcggtggagttcccagagatgttagca
gagatcatcagcaaccagttaccaaaattcaaagccgggagcgtcaagcccctcctcttc
caccagaaatga
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