Salvelinus namaycush (lake trout): 120062539
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Entry
120062539 CDS
T07522
Name
(RefSeq) RNA-binding protein Musashi homolog 1-like
KO
K14411
RNA-binding protein Musashi
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
120062539
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120062539
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
120062539
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
PHM7_cyt
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120062539
NCBI-ProteinID:
XP_038868520
UniProt:
A0A8U1F2D7
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All DBs
Position
Sna2:complement(36579085..36603019)
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AA seq
348 aa
AA seq
DB search
MDTEGSQSSLSSVDNSPHDPCKMFIGGLSWQTTQEGLNEYFCKFGEVKECMVMRDPVTKR
SRGFGFVTYIDQAGVDKVLAQNRHELDSKTIDPKVAFPRRAQPKLVTRTKKIFVGGLSVN
TTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDMVEKVCEIHFHEINNKMV
ECKKAQPKEVMSPTGTARGRARVMPYGMDAFMLGIGMLGYPGFQAATYASRGYPSIAPGY
TYQFPEFHLERTTLLTSSHPSELTAIPLSAYGPMAAAAAAAMRGSTQSRNAGYLGTSSPG
PMADLYAAASQDSALSSYLSAASPGPNSGFGHGLGGPLIATAFTNGYH
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggatacagaagggagccaaagcagcctgtcctccgtggacaactccccccacgacccc
tgcaaaatgttcatcgggggtctcagttggcagacaacacaagagggattgaatgaatac
ttctgtaaattcggcgaggtgaaggagtgtatggtgatgcgagatcccgttacgaagaga
tcgaggggattcgggtttgtaacatacatagaccaggctggtgtggataaagttttggca
caaaacagacatgagctggattctaaaacaattgatcccaaggtggcatttcctcgtaga
gcccaacccaagttggtgaccaggacaaagaagatctttgtgggaggcctctcagtgaac
acaaccatcgaagacgtcaagcagtactttgaccagtttggaaaggtcgatgacgccatg
ctcatgttcgacaaaaccaccaacagacacagaggtttcggctttgtgacctttgagaat
gaagacatggtggagaaagtgtgtgagatccatttccacgaaatcaacaacaaaatggtg
gagtgcaagaaagcccagcccaaggaagtgatgtcaccgacaggtacggctcgaggtcgt
gccagggtgatgccctacggcatggacgccttcatgctggggatcggcatgctgggctac
ccaggcttccaagcagctacgtacgctagccgtggctaccctagcatcgcgcctggatac
acctaccagttccctgaattccatttagagaggaccacccttctgacatcatcccacccc
tctgagctcacagccattccactgtcagcatacggaccaatggcagcagcagcagcagcg
gctatgagaggttccacccagtcacgtaacgcaggctacctgggcaccagcagccctggg
ccaatggctgacctgtatgcggcagccagtcaggactcagcactgagcagctatctcagc
gcagccagtcccggtcccaactcaggattcggccacggtcttgggggtcctcttatcgct
actgccttcaccaacggttaccactga
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