Salvelinus namaycush (lake trout): 120062550
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Entry
120062550 CDS
T07522
Name
(RefSeq) histone deacetylase 3-like isoform X1
KO
K11404
histone deacetylase 3 [EC:
3.5.1.98
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
snh03036
]
120062550
Enzymes [BR:
snh01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
120062550
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
120062550
HDAC complexes
SMART complex
120062550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
120062550
NCBI-ProteinID:
XP_038868531
UniProt:
A0A8U1H3R3
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Position
Sna17:31989237..32001369
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AA seq
428 aa
AA seq
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MSNRTAYFYDPDVGNFHYGAGHPMKPHRLSLTHSLVLHYGLYKKMQVFKPYKASQHDMCR
FHSEDYIDFLQKVSPNNMQGFTKSLNTFNVGDDCPVFPGLFEFCSRYTGASLQGATQLNH
KICDIAINWAGGLHHAKKFEASGFCYVNDIVISILELLKYHPRVLYIDIDIHHGDGVQEA
FYLTDRVMTVSFHKYGNYFFPGTGDMYEVGAESGRYYCLNVPLRDGIDDQSYRQLFQPVI
KQVVDFYQPTCIVLQCGADSLGCDRLGCFNLSIRGHGECVEFVKSFRIPLLVLGGGGYTV
RNVARCWTYETSLLVDEPISDELPYSEYFEYFAPDFTLHPDVSTRIENQNSRQYLEQIRS
TVFENLKMLNHSPSVQIHDVPSDILSYERTDEGDPDERGSEDNYSRPEAANEFYDGDHDN
DKESDVEI
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgtctaacagaacagcatatttttatgatccggatgtggggaactttcattatggtgct
ggtcaccctatgaaaccccatcgtctctcgctgacgcacagccttgttttgcactatggc
ctctacaaaaagatgcaggttttcaaaccatacaaagcctcacaacatgacatgtgccga
ttccattcagaagattacattgactttctgcaaaaggtcagccccaacaatatgcagggt
ttcacaaagagtctcaacacctttaatgttggggatgactgccctgtattcccaggcctg
tttgagttctgctccaggtatacaggagcatctctacagggagcaacacagctaaaccac
aagatatgtgacatcgccatcaactgggccgggggtcttcatcatgctaagaaatttgag
gcctctggattttgctatgtgaatgacattgtcatcagtatactggagcttctgaagtac
cacccgcgtgtgttgtacatagacattgacattcaccatggtgatggggtacaggaagcc
ttctacctgactgatcgggtcatgactgtatccttccacaagtacgggaactacttcttt
ccaggaacaggtgacatgtatgaggtaggggctgagagtggccggtactattgcctgaac
gtgcctctccgggatgggatcgatgaccagagctacaggcaactctttcagccagtcatc
aagcaagtggtggacttctaccagccaacctgtatcgttcttcagtgtggggctgactct
ctgggctgtgacagattagggtgcttcaacctcagtatacgaggccatggggagtgtgtg
gagtttgtgaagagcttcaggattcccctgctggtactgggaggaggagggtacacagta
cgcaacgtggccagatgctggacctatgagacctccctcctggttgatgagccaattagt
gatgagctgccctatagcgagtactttgagtattttgccccagatttcacactccaccca
gatgtcagcaccaggatagagaaccagaactcccgacagtacctggagcagatccgttcg
acggtctttgagaacttgaagatgttgaaccattcccccagtgtccagatccacgatgtg
ccctcggacatcctgagctacgagcgcactgacgagggagacccagatgagaggggctca
gaggacaactattccaggccagaggcagccaatgagttctacgatggtgaccatgacaac
gacaaggagagcgatgtggagatctga
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