Salvelinus namaycush (lake trout): 120062589
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Entry
120062589 CDS
T07522
Name
(RefSeq) transcriptional regulator ATRX-like
KO
K10779
transcriptional regulator ATRX
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120062589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
snh03000
]
120062589
03036 Chromosome and associated proteins [BR:
snh03036
]
120062589
Transcription factors [BR:
snh03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
120062589
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
120062589
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Motif
Other DBs
NCBI-GeneID:
120062589
NCBI-ProteinID:
XP_038868606
UniProt:
A0A8U1H3V0
LinkDB
All DBs
Position
17:38261351..38300384
Genome browser
AA seq
1557 aa
AA seq
DB search
MTKEYSKMSKASAESTDQMMEEEVGQPPITDQMMEEEEVDQHPITDQMMEEEEEPGSSAE
TERPSSSHTKRKPAVAAKHTGGNKSDASDESGQEDGASDNLSDDTTLQERIDCTACGQQV
NHFQRHSVFEHPMLHVLLCKSCYKYYTSDDINKDEDGMDEQCRWCAEGGNLICCDYCHNA
FCKKCVLRNLGRKELSMITDDDSKWSCYICSPQPLSDIASNCSNIMTKLESFWRTGRKKE
REVKGHSKGKGHHRHGKAVVNGKEHSDGSGTLTFSYKTLKVLKELVKGTKKLIEKTTGLN
NTFIQQAEEEQGGGGSGTRHLKAFRSVLADLKKAHAALEEDLESQFISPDQGLQNGDAVS
NTDGHDQIDNMVEDGQEAEEDKMADTEDGEELEEDGGLSEDAEMEGSPAPQDHSDTETDS
QAKDQTAVEEEEEDDRDKDIASVGPSVPDELFQMVESLADSAGLTPGNDAMEPTAASQSK
SPAAGSNRKSLETHKEKAMPKVKNLIVKLTPVPVVTTRTSRSKSKDKDGGKERSKDGGKE
RSKDGGKEKSEVEEGGGSEEDSRHSSQKKLAAKRKLKADDSDNSESDSDEDAKKKSSTAS
AKKTSKKKNSDGSSNSDSDLEKEMKGLSKLGPGKRRSSRVKKEREEKENKGGDRRRSYEL
KRKARGRGAKQQDSSSDDVEEEGGGGSGEESGDQQKIKPIVEETVVAGRGTFHQSSGDEG
KHDASQMADEEDDDPENRIVKKMLAQIKANSSSGAEESSDEDGDGEEKEQKKGKEGEEQE
EDDDDDEGGSDVDVKTIVGRRHRLLPHKLTLYEVESGEKEKPASKGKKETKRNRRKVGSD
DSADSDFKESASSSESGVSEEISEEISEMEESLSEEEESESEKEGSSHRRITRSSEKKKK
EERSFAQKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDTPKGQRKKIRKILKDDKLRMET
RDALKEEEERRRRISEREQLGEKLREVLVVEEASAVACPITTKLVLDVDEETKEPMVQVH
RNLVTKLKPHQVDGEEGKHDASQMADEEDDDPENRIAQMLLAQIKANYSSGAEESSDEDG
DGEEKEQKKGKGGEEQEEDDDDDEWGSGSDVDVKTIVGRRHRLLRHKLTLHEVESGEKEK
PASKGKKETKRTRRKVGSDDSADSDFKEAASSSESGVSEEISEKESSSEEESESEKEGSS
HRRITRSSEKKKEERSYAQKKKRRRIKVQDSSSDEKSGSGEDGSGKEDGDTPKGQRKKIR
KILKDDKLRMETRDALKEEEERRRRISEREQLGEKLREVLVVEEASAVACPITTKLVLDV
DEETKEPMVQVHRNLVTKLKPHQVDGVQFMWDCCCESVKKTSKNSGSGCILAHCMGLGKT
LQVVTLLHTLLLCEKLDFSTALIVCPLNTVLNWLNEFEKWPYGFKDKESLEVTELATVKR
PQERAAALQQWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKETFQKTLVDPGPDFVICDEG
HILKNEASAISKAMNSIKTRRRVVLTGTPLQNNLIECMSVTSCYIQTASLQGIGKVF
NT seq
4674 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaagagtacagtaaaatgagtaaggcctcagctgaatctacagaccaaatgatg
gaggaggaagtaggtcagcctccgattacagaccagatgatggaggaggaggaagtagat
caacatccgattacagaccagatgatggaggaggaggaggaacctgggagctcagcagag
actgagagaccctcctcttctcacaccaagaggaagcctgctgtcgcagccaagcacact
ggagggaataagtctgacgcctcggacgagagtggacaggaagatggagcctctgacaac
ctctcagatgataccactctgcaggagagaatagactgcaccgcctgtggacagcaggtt
aaccacttccagcgccactcagtgtttgagcaccccatgctccatgtgctcctctgcaag
tcgtgctataagtattacaccagcgatgacatcaataaagacgaggacggcatggacgaa
cagtgcaggtggtgtgctgaaggcggtaacctgatctgctgtgactactgccacaacgcc
ttctgtaagaagtgcgtcctgcgtaacctggggcgcaaggagctgtccatgatcaccgac
gacgacagtaaatggtcctgctatatctgcagccctcagcccctctcagacatcgcctcc
aactgctccaacatcatgaccaagctggagagcttctggcgcacgggacgcaagaaagag
agggaggtgaaagggcacagtaagggtaaaggtcaccaccgccatggtaaagctgtggtg
aatggtaaggagcattcagatgggtcagggaccctcaccttctcctataagaccctgaag
gtcctcaaggagctggtgaaggggaccaagaagctgattgagaagaccacagggctcaac
aacaccttcatccagcaggctgaggaggagcagggaggaggtggcagcgggaccagacac
ctcaaggccttcaggtctgttttggctgacctgaagaaggcccatgctgccctagaggag
gacttggagtcacagttcatttccccggaccaggggctgcagaacggggatgctgtctcc
aacaccgacggccacgaccagattgacaacatggttgaggatggacaggaggcagaagag
gataaaatggccgacactgaggatggggaggagctagaggaggatgggggcttgtcagag
gacgcagagatggaggggagccctgcgcctcaggaccactcggacacagagacagacagc
caggccaaagaccagacagcagtggaggaggaggaggaggatgaccgggataaagacatt
gcgtccgtcgggccgtccgtccctgacgagctcttccaaatggtagagagtctggcggac
tccgcagggttgacgcccggcaacgacgccatggaacccacagctgctagccaatccaag
agccccgccgccggctcaaacaggaagtcacttgaaacccataaggagaaggccatgccc
aaggtgaagaacctgatcgtgaagctgacacccgttcccgtggttaccacacgcacctcc
aggtctaagagcaaggataaggatggagggaaggagaggagtaaggatggagggaaggag
aggagtaaggatggagggaaggagaagagtgaggtggaagaaggtgggggctctgaggag
gacagccgccactccagccagaagaagctggcggccaaacgcaaactgaaagccgacgat
tcagacaactcagagtccgactcagacgaagacgcgaagaagaagtcttccacggcttct
gccaaaaagacatccaagaagaagaactcggacggctcctctaactccgactctgacctg
gagaaggagatgaagggactcagcaaactggggccggggaaacggaggagcagccgcgtg
aagaaagaaagagaggagaaggagaacaagggcggggatcggaggcggtcgtacgaactg
aaacgcaaagccagaggtagaggagccaagcaacaagattcatcgtctgatgacgtggag
gaggagggaggaggagggtctggagaggagagtggagaccagcagaagattaaacccatc
gtggaggagacggtggtagcagggaggggaaccttccaccagtcctcaggagatgaaggt
aaacatgacgcctctcagatggctgatgaggaggacgatgatccagagaacagaattgtc
aagaagatgctggcccagatcaaggctaactcctcttcaggagcggaggagagctctgac
gaggacggagatggagaagagaaggaacagaagaaggggaaggaaggagaggagcaggag
gaggatgacgatgatgatgaagggggctctgacgtggacgtgaagacgattgtggggcgt
cgccaccggctgctcccccacaaactgacgctgtacgaagtggagtcgggagagaaggag
aaaccagccagcaaggggaagaaggagaccaagaggaacagacggaaagtgggtagtgat
gactcagcagactcagactttaaggagtcagcgagcagcagtgagtcaggagttagtgag
gagatcagtgaggagatcagtgagatggaggagtcgttgtcagaggaggaggagtcggag
tctgagaaggaaggcagtagccacaggaggatcacgcgctcctccgagaagaagaagaag
gaggagaggagcttcgcccagaagaagaaacggcgtcgtatcaaggtccaggattcttca
tctgacgagaagagcgggtcaggagaggacggctcggggaaggaggatggagacacacct
aaaggacagaggaagaagatcagaaaaatcctcaaggacgacaagctgaggatggaaacg
agggatgccctgaaggaggaggaggagaggaggagacgcatctcggagagggagcagctc
ggggagaaactcagagaggtactcgtggtggaggaggcgtctgccgtggcttgtccaatc
acaaccaagctggtgctggatgtagacgaggagaccaaggagcccatggtgcaggtccac
cgcaatctggtcactaaactcaaaccacaccaggtcgacggagaggaaggtaaacatgac
gcctctcagatggctgatgaggaggacgatgatccagagaacagaattgcccagatgctg
ctggcccagatcaaggctaactactcttcaggagcggaggagagctctgacgaggacgga
gatggagaagagaaggaacagaagaaggggaagggaggagaggagcaggaggaggacgac
gatgatgatgaatggggctctggctctgacgtggacgtgaagacgattgtggggcgtcgc
caccggctgctccgccacaaactgacgctgcacgaagtggagtcgggagagaaggagaaa
ccagccagcaaggggaagaaggagaccaagaggaccagacggaaagtgggtagtgatgac
tcagcagactcagactttaaggaggcagctagcagcagtgagtcaggagttagtgaggag
atcagtgagaaggaatcgtcgtcagaggaggagtcggagtctgagaaggaaggcagtagc
cacaggaggatcacgcgctcctccgagaagaagaaggaggagaggagctacgcccagaag
aagaaacggcgtcgtatcaaggtccaggattcttcatctgacgagaagagcgggtcagga
gaggacggctcggggaaggaggatggagacacacctaaaggacagaggaagaagatcaga
aaaatcctcaaggacgacaagctgaggatggaaacgagggatgccctgaaggaggaggag
gagaggaggagacgcatctctgagagggagcagctcggggagaaactcagagaggtactc
gtggtggaggaggcgtctgccgtggcttgtccaatcacaaccaagctggtgctggatgta
gacgaggagaccaaggagcccatggtgcaggtccaccgcaatctggtcactaaactcaaa
ccacaccaggtcgacggggtccagttcatgtgggactgctgttgtgagtcggtgaagaaa
accagcaagaactctggttctggatgtatcctggctcactgtatgggcctgggaaaaaca
ctgcaggtggtaaccctactccacacactactgctgtgtgaaaagttagacttttccacg
gctctgatcgtctgtcctctcaacacggttctcaactggctcaatgagtttgagaagtgg
ccgtacggcttcaaggacaaggagagtttagaggtgacggagctggccacggtgaagcga
cctcaggagagagcggctgctctgcagcagtggcaggaggatggagggatcatgatcatt
ggctatgagatgtaccgtaacctcacacagggtagaaacatcaagagcaagaaactcaaa
gagaccttccagaagaccctggttgacccaggcccagactttgtgatctgtgatgagggc
cacatcttgaagaacgaagcgtcggccatctctaaagccatgaactccatcaagacccga
cggagagtggtgctcaccggcacaccactgcagaacaacctcatagagtgtatgtccgtt
acttcctgttatatccagaccgctagcctacagggcattgggaaagtattctga
DBGET
integrated database retrieval system
