Salvelinus namaycush (lake trout): 120062799
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Entry
120062799 CDS
T07522
Name
(RefSeq) chondroitin sulfate N-acetylgalactosaminyltransferase 1-like
KO
K00746
chondroitin sulfate N-acetylgalactosaminyltransferase 1/2 [EC:
2.4.1.174
2.4.1.175
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00532
Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
snh01100
Metabolic pathways
Module
snh_M00058
Glycosaminoglycan biosynthesis, chondroitin sulfate backbone
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00532 Glycosaminoglycan biosynthesis - chondroitin sulfate / dermatan sulfate
120062799
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120062799
Enzymes [BR:
snh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.174 glucuronylgalactosylproteoglycan 4-beta-N-acetylgalactosaminyltransferase
120062799
2.4.1.175 glucuronosyl-N-acetylgalactosaminyl-proteoglycan 4-beta-N-acetylgalactosaminyltransferase
120062799
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120062799
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Gene cluster
GFIT
Motif
Pfam:
CHGN
Glyco_transf_7C
Glyco_tranf_2_2
TOBE_3
Motif
Other DBs
NCBI-GeneID:
120062799
NCBI-ProteinID:
XP_038868799
UniProt:
A0A8U1H1Q5
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Position
Sna18:34535602..34543031
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AA seq
542 aa
AA seq
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MCSESTMFRRWLLALVVRVGVIALVVCCCLSLLYLLACKPPISYSHEQAQVWAGGATSKE
GYLALLQESEDTHRHYINSLSKQIAQLKEALQMRTQQLQESLEKARAKGILPMGLEGLHR
PQTHTDLQEFFKAQLSRAEVQSGEKLPSEYAVIPFESFTLHRVYQLEMGLTRHPEERPVR
KDRRDELAGTLEIALQVLNGPRRHGEHRRRSYSPSDFIEGLTRTERDKGTVYELMFKGEG
PQDFRHLVFFRPFGPVVRVKNERVDTRHMLINIIVPLSRRADTFRQFINNFRKVCIQQEG
KTHLTVVYFGRDQIDEVKAIMDQTSRETQFRNFTLIQLNEEFSRGRGLEVGARAWRRSHN
VLLFFCDVDIHFTLDFLTSCRLNAEPGKKVFYPVLFSQYNPSLIDNNQSPFPSIQQQLVI
MKDAGFWRDFGFGMTCQYRSDFINIGGFDRNTKGWGLEDVHLYRKYLHSKLMVIRSPSRN
LFHLWHEKQCADELQPDKYKMCMQTKAMSEASHGHLGELFFTQEIQEHLERQKLLNDSSH
LR
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgtgctctgaatccacaatgttccggaggtggctgttagctctggtggtccgtgttggg
gtcatagcactagtggtgtgctgctgcctgtctctactctacctgctggcctgcaaaccc
cccatcagctacagccatgaacaggcccaggtctgggctggaggagccaccagtaaagag
ggttacctggcgctactgcaggagagcgaggacacacacaggcactatattaacagtctc
agtaagcagatagcccagctcaaagaggctctccagatgaggacccagcagctgcaggag
tctctggaaaaggccagggccaaagggattctacctatggggctggagggcctgcatagg
ccccagacacacaccgacctccaggagttcttcaaagcccaattgagccgggctgaggtc
cagtctggtgagaagttgcccagtgagtacgctgtgattcccttcgaaagcttcaccctg
cacagggtgtaccagctcgagatggggctgacccgtcatccagaggagaggcctgtgagg
aaggaccggagagacgagctggcaggtacgctagagatagccctgcaggtcctcaacgga
ccacggagacacggggagcaccgccgacgctcatattcaccatcggacttcatagagggg
ctgacccgtacagagcgtgacaagggaacagtgtatgagctgatgtttaagggcgagggg
ccgcaggacttcagacacctggtgttcttcagacccttcggcccggtggtcagggtgaag
aatgagagggtggacacacgccacatgctcatcaacatcatagtaccactgtccaggagg
gctgacacattcagacagttcatcaacaacttcagaaaggtgtgcatccagcaggaaggg
aagacccacctcactgtggtctactttggcagggaccagattgacgaggtcaaagccatc
atggatcagacatccagggaaacccagttccggaacttcacgctgatccaactgaacgag
gaattctctcgtgggcggggcttagaggtgggtgcgcgggcctggaggcggagccacaac
gtgctgctcttcttctgcgacgtcgacatccactttaccctagacttcctcacttcctgc
agactcaatgcagagcctggtaagaaagtgttctacccagttctcttcagtcagtacaat
ccatctcttatcgacaataaccagagtcccttcccttctattcaacaacaactggtgata
atgaaggatgctggattctggagagattttgggtttggcatgacttgccagtataggtct
gatttcatcaacataggtgggtttgaccggaacaccaaaggctggggtttggaggatgtt
cacctatacagaaagtacctgcacagcaagctgatggtgattcgctctccctcccgtaac
ctcttccacttgtggcatgagaagcaatgcgcggacgagctgcagccagacaagtataag
atgtgtatgcagacgaaggccatgagcgaggcctctcacggccacctgggggagctgttc
ttcacacaggagatccaggagcacctggagaggcagaaactactgaacgactcaagtcac
ttgaggtag
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