Salvelinus namaycush (lake trout): 120062911
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Entry
120062911 CDS
T07522
Symbol
zgc:65851
Name
(RefSeq) low molecular weight neuronal intermediate filament
KO
K04572
neurofilament light polypeptide
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
snh01009
]
120062911 (zgc:65851)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
snh04812
]
120062911 (zgc:65851)
Protein phosphatases and associated proteins [BR:
snh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
120062911 (zgc:65851)
Cytoskeleton proteins [BR:
snh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
120062911 (zgc:65851)
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Gene cluster
GFIT
Motif
Pfam:
Filament
Filament_head
Ski7_2nd
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
120062911
NCBI-ProteinID:
XP_038868899
UniProt:
A0A8U1F3Q4
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Position
Sna18:30439932..30444342
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AA seq
524 aa
AA seq
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MSYSGDVYSSSSYRKIFGEAPRNSGRMTVGSSPSRLSSGFRSSSAHRNYGSPSMLTSSGY
RKVGAGRNFHSSMSDSMDLNQSTAVTNEMKIIRTNEKEQLQGLNDRFVSFIEKVHNLEQQ
NKVLEAEVTMLRQRHTEPSRLHDLYEQEIRELRARVEELTHEKSQMHLDCVQMNETLDRV
KQKLDEETRLREEAEGTLISYRKDVDDATMSRLELEKKVESLLDEIAFLRKVHEEELQEL
QASLQASQVSVEMDMREGKPDLAVALKDIRAQYEVLSAKNQNQAEEWYRSKFASVNEAAA
RNQDQVKHSREELNEYRRQVQARTLEIEALRGHNEALERQMAEMEDRHSNEMGEMQETIQ
QLESALRSTKGEMSRHLREYQDLLNVKMALDIEIAAYRKLLEGEECRLSTVGGNILQSGY
SGFSYSSGRSYALGSSAPYRMRGAKPEEPEEEEDEEEKEEEEEENGEEGEEGDENAEENG
NGDEEEDEEEEEEDQKKKDEKNGKDEKDEKKGEKGSAPSKSTKS
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgagctactccggcgatgtctactccagcagttcctatcggaagatcttcggggaagcg
ccccggaactccggccgcatgaccgtaggcagcagcccctctcgcctgtccagcggattc
cgctccagcagtgcacaccgcaactatggctccccatccatgctcacatcctccggctac
cgcaaggtgggcgccgggcgcaacttccactcctccatgtccgactctatggacctgaac
cagtccacggccgtcaccaacgagatgaaaatcatccgcaccaacgagaaggagcagctc
cagggcctgaacgaccgcttcgtctccttcatcgagaaggtccacaacttggaacagcag
aacaaggtgctggaagccgaggtgaccatgctgcgccagcgccacactgagccctccaga
ctgcacgacctgtacgagcaagagatccgcgagctgagggcccgcgtcgaggaactgacg
cacgagaagagccagatgcacctggactgcgtgcagatgaacgagacgctggaccgcgtt
aagcagaagctggacgaggagacgaggctccgcgaggaggcggagggcaccctgataagc
taccgcaaggacgtggatgatgccacgatgtcccggctcgagctggagaagaaagtcgag
tcgctgctggatgagatcgccttcctcaggaaagtgcacgaggaggagctgcaggagctg
caggcttccctgcaagcctcacaggtgtcagtggagatggacatgagggagggtaaaccc
gacctggccgtggccctgaaggacatccgtgcccagtacgaggtcctgtcagccaagaac
cagaaccaggcggaggagtggtaccgctccaagtttgccagtgtgaatgaggcggccgcc
cgcaaccaggatcaggttaagcatagcagggaggagctaaatgagtaccgcaggcaggtg
caggcccgtaccctggagatcgaggccctcaggggccacaatgaggccctggagaggcag
atggctgagatggaagaccgccacagcaacgagatgggagagatgcaggagaccatccag
cagcttgagtctgctctccgaagcaccaagggtgagatgtcccgtcatttgcgtgagtac
caggacctgttgaacgtcaaaatggccctggacattgagatcgctgcttacaggaagctg
ctggaaggtgaagagtgccgtctgagtacagtgggcggaaatatcctgcagtcaggctac
tctggcttctcctattcgtccggccgctcctacgccctgggttcctccgccccctacagg
atgaggggagccaagcctgaggaaccagaggaggaggaggatgaggaagagaaggaggaa
gaggaagaggagaatggggaggaaggagaggagggagatgagaatgcagaggagaatgga
aacggtgatgaggaggaagatgaggaagaggaggaggaagatcagaagaagaaagatgag
aagaatggcaaggatgagaaggatgagaagaagggagagaagggaagtgctcccagcaag
agcaccaagagctaa
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