KEGG   Salvelinus namaycush (lake trout): 120062927
Entry
120062927         CDS       T07522                                 
Name
(RefSeq) protein polybromo-1-like
  KO
K11757  protein polybromo-1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    120062927
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:snh03021]
    120062927
   03036 Chromosome and associated proteins [BR:snh03036]
    120062927
Transcription machinery [BR:snh03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     120062927
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    120062927
SSDB
Motif
Pfam: Bromodomain BAH HMG_box HMG_box_2 HMG_WDHD1
Other DBs
NCBI-GeneID: 120062927
NCBI-ProteinID: XP_038868915
UniProt: A0A8U1F3I0
LinkDB
Position
Sna2:complement(39090271..39127394)
AA seq 1625 aa
MSSKRRRATSPSSSSVSGGDFDDASSSTPGSGRKRRRPSNVPTVDPIAVCHEVYNTVRDH
KDDQGRLLCELFIRVPKRRKQPDYYEVVSQPIDMTKIQQKLKSEDYQDVEQLTADFQLMF
NNAKTYYKADGVEYQKACRLWELYVHTRNEFVQPGDGDEDDDDGEDILDNPALFTEDETP
PSCLKEVLEQLLDAVVSYTDHSGRVISELFQKLPSKVHYPDYYAVIKEPLDLRAITQRIQ
IGYYKSVTGMAKDVDLLVKNAKTYNEPGSQVFKDANIIKKVFIQRKTEIDHAEPTKTSVR
IKNRRSAQGDRFSAITLALQYGSENDEDALLSGSVHYDEGESEAECLSSSMDMGNPVFQL
YEAVRGGRNSQGPLLSEPFLQLPSRKEYPDYYQQIKQPIALQQIREKMKNGEYESVEQMD
SDLTLMLENAKCYNVPTSGISKRALRLQQILLLKKRELLRRGDEEEQDSILSSDTGTGSA
TKRKSHKKNMKNRMKALYAAVTEAREAGTNRRLCDLFMVKPSKKDYQDYYKVILEPMDLK
TIEHNVRSKRYATEEALMDDMRLMFRNARHYNEEGSQVYNDAGILEKIVKDKRKELGASP
EEDIDNMGSPKLKLRKSGVSPKKSNKCLTLLQQRLNELYDAVRNYTDARGRRISTIFLRL
PSRAELPDYYATIKRPIDMERLRSHMAGGRYQDVDALVEDFAVMFNNACTYNEPESLIYR
DALLLHRVLLDTRRLQEGGEEGGGSPPAVGPVVMELIRNLFVSVLAHQDEEGRCYSDSLA
EIPAQDPTSPENPPLNFDVIRANVDRGRYRRLDVFQEHMFNVLEKARRLHRTDSEIFEDA
VELQQFFIKIRDELCKNGEILLSPALSYTSKHLHNDVEQEKREKVPKEIEEDKLKREEEN
KEEGEKAEDPAGGGAGPKRTYRQDCSFENSTYHVGDCVYMQPAEANLKPHIVCIERLWED
EAGEKWLYGCWFYRPSETFHLATRKFLKQEVFKSDYFNKVPISKILAKCMVMFVKDYFKL
QPEGVRPEDVYVCESRYSARNKAFKKIKMWAGPAGVRFVPRDVPLPVIRVASMYAKRDQE
KLLAVADNGSHSIVDKELEDVPVEMSGGEPGCQYYDQLHYNNMWLKVGDCVYVQSHGLVK
PRVGRIEKLWVLDGAAFFFGPIFIHPEETGHEPTRMFYKREVFLSNVEEACPMTCVIGKC
VVSSFKDYLSCRPTEVSEEDVFLCESRYIESEKQMKKFKGLKRFSLHAKVVDDEVYYFRK
LIVPQKEPSPLLNKKIEELELKLADMDEGDEDLDDLEDENEAPETPSMPTIQTPLASDLD
IMPYTPPPQSTPKAKGVSKKEGAKRKVNMSGYILFSSEMRSVIKTRHPDFSFGELSRLVG
TEWRNLEAPKKVEYEERAARVVERQEKERAAQQQASPRAGTPVGSMMGVVPSPSHMGMMP
GPGMMGAYGPPYGMPMQGPHEGPQHLQPDMPGYHPGMPYPGMMGPGMNGMQGSPGGHYYM
QQPGMFSPGQQAPPPYPGQLGQPSHLQPMTPMFVAPPPKTQRVLHSEAYLKYIEGLNAET
DTVSKWDQSLKARRRDAHLSKDQESRLPSHWLKSKGAHKTMADALWRLRDLMLRDSLNIR
QVYNM
NT seq 4878 nt   +upstreamnt  +downstreamnt
atgagttcgaaaaggagaagggccacctctccatccagtagtagtgtgagcggaggggac
tttgacgatgcctcctcctccactcctggaagcgggcgaaagaggagaagaccctctaat
gtccctacggtagatcctattgctgtgtgccatgaggtgtacaacactgttagggaccac
aaggacgaccagggaagactgctttgtgagctgttcatcagggtaccaaagagaaggaaa
cagccagactactatgaggtggtgtcccagcctatagacatgaccaagatccagcagaag
ctcaagtcagaggactaccaagatgtggagcagctcactgctgatttccagctcatgttc
aacaacgccaagacctactataaggctgatggtgtggagtaccaaaaggcctgcaggctg
tgggaactctatgtccacaccaggaatgagtttgttcagccaggggatggtgatgaagat
gacgacgatggtgaagacatcctagataatcctgctctcttcactgaagatgagacccca
ccgagctgcctgaaggaggttttggagcagctgctagatgctgtagtgtcatacacggac
cactcaggaagggtcatcagtgagctcttccagaagctgccttccaaagtgcactaccca
gactactatgctgttatcaaggagccccttgatctgagagccatcactcagagaatacag
attggatactacaaaagtgtcaccggcatggctaaggatgttgaccttctggtgaaaaat
gcaaaaacatacaatgaaccaggatctcaggtttttaaggatgctaacatcatcaagaag
gtcttcatccagagaaagactgagatagaccatgctgagcccactaagaccagtgtccgc
atcaagaaccggaggtcagcccagggagaccgtttctctgccatcaccctggctttgcag
tacggttcagagaatgacgaggacgccctgctctctggctctgtgcattatgacgagggt
gagtctgaggcggagtgcctgagctccagtatggacatgggtaacccagtgttccagctg
tacgaggctgtgagggggggcaggaacagccagggaccgctcctttctgaacccttcctc
cagctgccctccaggaaagaataccctgactactaccagcagatcaaacagcccatcgca
ctgcagcagatcagggagaagatgaagaatggggagtacgagagcgtggagcagatggac
tctgaccttactctgatgcttgagaacgccaagtgttacaacgtgcccacctcaggcatc
tccaaacgggccctccggctgcagcagatcctgctgcttaagaagagggagcttttgagg
agaggcgacgaagaggaacaggacagcattctgtcgtctgacacaggaactggcagtgcc
accaagaggaaaagccataagaagaacatgaagaaccgtatgaaggcactgtatgctgca
gtgactgaagccagagaggcagggaccaaccggaggctctgtgatctgttcatggtcaag
ccctccaagaaggactaccaagactactacaaggtgatcctggagcccatggaccttaag
accatcgagcacaacgtccgctcaaagcgctacgccaccgaagaagccctgatggacgac
atgaggctgatgttccgcaatgcacgtcactacaacgaggagggatctcaggtttataac
gacgctggcatcctggagaagatagtgaaggacaagaggaaggagctaggagcttctccc
gaggaggacattgacaacatgggatctcctaagctgaaactaaggaagagtggtgtgtct
cctaagaagtccaataagtgcctgaccctcctgcagcagcgcctcaacgagctgtatgac
gctgtgaggaactacacagacgccagggggcgacgtatctccaccatcttcctgcgcctg
ccctcccgtgccgagctgcctgactactacgccaccatcaagaggcccatcgacatggag
cgcctgcgcagccacatggcgggcggccgttaccaggacgtggatgctctggtggaagac
tttgcagtgatgttcaacaacgcctgtacctacaacgagccagagtccctgatctaccgc
gacgctctgctcctccaccgcgtgctcctggatacccggcggctgcaggagggaggggag
gagggcggcggctctccccctgctgtagggcccgtggtcatggaactgatcaggaacctg
tttgtgtctgtgctggcgcaccaggacgaggaggggaggtgttacagcgactcactggct
gagatccctgcccaggacccgaccagcccggagaaccctccgctcaacttcgacgtgata
cgggccaacgtagaccgaggacgctaccgcaggctggacgtgttccaggagcacatgttc
aatgtgctggagaaggccaggcgcctacacaggacggactctgagatctttgaggatgcg
gtggagctgcagcagttctttataaagatccgggatgagctgtgtaagaacggagagatc
ctcctctcccctgcgctcagctacacctccaaacacctgcacaatgacgtggagcaggaa
aagagagagaaagtacctaaggagatagaggaggacaaactgaagagggaggaggagaac
aaagaggagggagagaaggctgaggacccagctgggggaggtgcggggccaaagaggaca
taccgtcaggactgcagctttgagaacagcacctaccacgtgggtgactgtgtctacatg
cagccagcagaggccaacctcaagcctcacatcgtttgcatcgagcgcctgtgggaggat
gaagcaggtgagaagtggctgtatggctgttggttctacaggcctagtgagaccttccat
ctagccacacgcaagttcctcaagcaagaggtcttcaagagtgactacttcaacaaagta
ccaatcagcaagatactggcaaaatgcatggtcatgtttgtcaaggattacttcaagctt
cagcctgagggagtaagaccagaggacgtgtatgtctgtgagtcccgttactctgccagg
aacaaggccttcaagaaaatcaagatgtgggccgggccagccggcgtgaggtttgtccct
cgggatgtgccactgcccgttatccgggtggcctccatgtatgccaagcgtgatcaggag
aaactgttggccgtggccgataacggcagccacagtatcgtcgacaaggagcttgaggat
gtcccggtagagatgagtggaggggagccaggctgtcagtactacgaccagctccactac
aacaacatgtggctgaaggtgggagactgtgtctacgtccagtcacatgggctcgttaaa
ccccgtgtcggcaggatagagaagctgtgggtgctcgacggcgcagcatttttcttcgga
cccatcttcatccacccagaggagacaggacacgagcccaccaggatgttctacaagaga
gaggtgttcctcagcaacgtggaggaggcctgccccatgacctgcgtcataggtaaatgt
gtggtgtcgtcctttaaggactacctttcgtgtcggcccactgaggtgtctgaggaggac
gtgtttctgtgtgagagccgttacattgagagtgagaagcagatgaagaagtttaagggc
ctgaagcgcttctccctccacgctaaggtggtggacgacgaggtctactacttcaggaag
ttgatagtgccccagaaggagccatctcctctactgaataagaagattgaggaactggag
ctgaaactggcagacatggatgagggggatgaggatctggatgacctggaggatgagaac
gaggctccagagaccccctccatgcccaccattcagacccctctggcaagcgatttggac
atcatgccttacacccctcctccccagtccacccccaaggcgaagggcgtttctaagaag
gaaggagccaagaggaaggtcaacatgagtggttatatcctattcagcagtgagatgcgt
tcggtcatcaagacccgccaccctgacttctccttcggggagctcagccgtctggtgggc
accgagtggaggaacctggaggctcccaagaaagtagagtatgaagagcgagcagccagg
gtggtggagcggcaggagaaggagagggcagcccagcagcaagcatccccgagagcaggt
accccagtagggtccatgatgggggtggtgccttcgcctagccacatgggaatgatgcct
ggtccaggcatgatgggagcttacggccccccctacggcatgcccatgcagggcccccat
gagggcccccaacacctccagccagatatgcctgggtaccaccctggcatgccctacccg
ggtatgatgggtcctggtatgaatggcatgcaaggaagtcccggaggccactactacatg
caacagcctgggatgtttagcccggggcagcaggctcctccaccctacccaggccagcta
ggccagccctctcacctccagcccatgactcccatgtttgtggctccaccgcccaagaca
cagagggtgcttcactctgaggcctacctcaagtacatcgagggcttgaacgcagagacc
gacacagtaagcaagtgggaccaatctctcaaagcgcgtcggagagatgcccacctgtcc
aaagaccaggagagcaggctcccttcccattggctgaagagcaagggagcccacaagacg
atggcagatgcactgtggcgcctgcgggacctgatgcttcgagactcactgaacatacgt
caggtgtacaacatgtaa

DBGET integrated database retrieval system