Salvelinus namaycush (lake trout): 120062943
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Entry
120062943 CDS
T07522
Symbol
gcnt4a
Name
(RefSeq) beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase 4
KO
K09663
beta-1,6-N-acetylglucosaminyltransferase 4 [EC:2.4.1.-]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00512
Mucin type O-glycan biosynthesis
snh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00512 Mucin type O-glycan biosynthesis
120062943 (gcnt4a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
snh01003
]
120062943 (gcnt4a)
Glycosyltransferases [BR:
snh01003
]
Glycan extension
O-Glycan
120062943 (gcnt4a)
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Motif
Pfam:
Branch
Motif
Other DBs
NCBI-GeneID:
120062943
NCBI-ProteinID:
XP_038868924
UniProt:
A0A8U1F3K1
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Position
Sna18:complement(37980531..37985467)
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AA seq
453 aa
AA seq
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MSDGISEIRLTVILAQLTSRMKIRCALFHKLTQRCFLLSLALLLLCLLKLFYAKVTLRNS
FYIEPYGITDRSSQNSKHQYNINCTAIYQLDPVEVGKSLEIRRKVIVDLEDDRLVSLTSD
CERYIETRGYDVIPVSEEERGFPLAYSLVVHKNAAMVERIFRATYAPHNLYCIHYDQKSS
QSFIAAMMNLAHCFPNLFLASKLESVQYAHITRLNADLNCLNDLLERSEVKWKYVINLCG
QDFPLRSNGELVSELQALNGANMLETSRPSELKKQRFRFQHQLKDVPYEYRRLPVRTTQA
KAPPPHGIEMFIGSAYFVLSRDFVHYVETSRVARDFLEWSADTYSPDEHFWATLTRIPGV
PGEISRSAPDVTDLKSKTRLVKWNYLEGSLYPPCTGTHMRSVCIYGAAELRWLLNYGHWF
ANKFDPKVDPVLIKCLEEKLDEKRRQWENTVQN
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacggaatcagcgaaatccgtttgactgtgatcctggctcagttgacatcccga
atgaaaataagatgtgccctgttccataaattgacacagaggtgcttcctgttgtccctg
gccctgctgctgctgtgtctgctgaagctgttctatgctaaagtaactctgaggaacagt
ttctacatcgagccctatggaatcacagaccgctcctcacagaactccaaacaccagtac
aacatcaactgcactgccatctaccaactggaccctgtggaggtagggaagtcattggag
atcagacgcaaagtcattgtggacttggaggatgaccgcctcgtgtctttaacctcagac
tgtgagaggtacatcgagacgagaggatatgacgtcatcccagtgtcggaagaggagcgg
gggttcccgctggcgtactccttggtggtgcataagaacgctgccatggtcgagaggatc
ttcagggccacctacgcccctcacaacctctactgcattcactatgaccagaagtcctct
cagagcttcatagcggccatgatgaacttggctcactgcttccccaacctcttcctagcc
tccaagctggagtcagtgcagtacgcccacatcacacggcttaacgccgacctcaactgc
ctcaacgacctgttagaaaggtcagaggtcaagtggaagtatgtcatcaacctctgcggc
caggacttccccctcaggtcgaacggtgagctggtgtcggagctgcaggctctgaacggt
gccaacatgctggagacctcccgtcccagcgagctgaagaaacagcgcttccgtttccag
caccagctgaaggatgtgccctacgagtaccgccgcttacccgtccgaaccacccaggcc
aaggcgccgccgccgcacggcattgagatgttcatcggcagcgcctacttcgtcttgtcc
cgtgactttgtccattacgtcgaaaccagccgggtggcgagggacttcctggaatggtca
gctgacacttactctccggatgaacacttctgggcgacgttgacgagaatccccggtgta
ccgggagagatctcccggtctgccccagatgtaacagacttgaagagtaagacacgtctg
gtgaaatggaattatctggaagggtctctgtaccctccctgcactgggactcacatgagg
agtgtctgtatatatggggctgcagagctgcgatggttgctaaactatggccactggttc
gctaacaagtttgaccccaaagttgacccggtgcttatcaagtgcttggaggagaaattg
gatgagaaacgtaggcaatgggaaaacacggtgcagaattga
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