Salvelinus namaycush (lake trout): 120062959
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Entry
120062959 CDS
T07522
Symbol
wdfy3
Name
(RefSeq) WD repeat and FYVE domain-containing protein 3
KO
K22262
WD repeat and FYVE domain-containing protein 3
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
120062959 (wdfy3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120062959 (wdfy3)
Membrane trafficking [BR:
snh04131
]
Autophagy
Aggrephagy
Scaffold proteins
120062959 (wdfy3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beach
FYVE
WD40
WD40_CDC20-Fz
PH_BEACH
NBCH_WD40
Beta-prop_TEP1_2nd
WD40_Prp19
Beta-prop_EML
WDR55
WD40_WDHD1_1st
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
Beta-prop_IFT140_1st
EIF3I
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
DUF4800
Beta-prop_DCAF4
Beta-prop_WDR35_TULP_N
Get5_N
Beta-prop_SCAP
FYVE_CARP1-2
Motif
Other DBs
NCBI-GeneID:
120062959
NCBI-ProteinID:
XP_038868941
UniProt:
A0A8U1F3H2
LinkDB
All DBs
Position
Sna18:41909647..42017528
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AA seq
2034 aa
AA seq
DB search
MAEKSSWTVVFLGQFTPQERTSNDEDFGGLLSANLILLRNRLLDILLKLLFTSKEKCTVN
AQACEELVRTLGFDCVVCSLTALCPPLQDMACEELVRTLGFDYVVCSLTALCPPLQGMAC
EELVRTLGFDCVVCSLTALCPPLQGMACEELVRTLGFDWLLMFTEEHLHSSSVTAALWIL
VVLLSNQPILTRFKEGLTGGEWLDHTDSVLTNKIGTVMGFNVGRSAGGRSTLREINRDAC
HFPGFPVLQTLLPKHTNVPELYFLLMALFLQQPVTELPDSLQFDLDSIWTFIFGVPASSG
TIVGSIHSVCTEAGFLLLGMLRSMLNLPWQSEEEGSWLREYPVTLMQFFRYLYHNVPDLA
PMWHSPEFLCVLAASVFPFNIRPYSEMVSDLDDEAGSPTEEFKAFTADTGMNRSQSEYCN
VGSKTYLTNHPAKKYVFDFMKVLIMDNLCLTPASKQTSTIDLLLEASPERSTRTQQKEFQ
SYILDSVMEHLLAADVLLGEDASLPITTGGSYQVLVNNVFYITQRVVDKLWQGMFNKESK
MVVEFIVQLIGQSKRRSQSLSLDSLYHCLNRTVLYQLSRPHKTVPQQVALLDSLRVLTVN
RNLVLGPGNHDQEFVACLAHCFINLHVGSSVEGFGLEAEARMTTWHVMMPAENGPDNRHS
QEVSEGRQLLLKAVNRVWTELMHSKRPMLEDIFKVSLPTNDRGHVDISTARPALEEPALK
SWQNHLVHEKKCISRGESVAPASQSKLSRVSSGFGLSKLTGARRNKKENSLNKNNLSVQE
TFQWMFTHIAVVRDLVAMQYKEYQERQQNVLKYVTEEWSSIEYELLRERGLWGPPIGSHL
DKFLLEMTEGPCRMRKKMVRNDMFYIHYPYVPEPEPSANGQIPKPVRYRRAISYDSKEYY
MRLLSGNPGMYQHSIEQDTEGETTQHEPGEVHGEDTIARVKGLVKAPLKRSRSTTDRADE
EQDLLQEQILESGGLDEEQRTDNTSLLRLLEEGEKIQHMYRCARVQGLDTSEGLLLFGKE
HFYVIDGFTMTVSREIRDIETLPANLHETIIPRGARQGQSQLKRTCSIFAYEDIKEVHKR
RYLLQPMAVEVFSGDGRNYLLAFQKGVRNKVYQRFLAVVPSLADSSESVSGQRPNTSVEQ
GSGLLSTLVGEKSVTQRWERGEISNFQYLMHLNTLAGRSYNDLMQYPVFPWILADYDSEE
LDLNNPRTFRNLAKPMGAQTDDRLTQYKKRFKDWEDPTSETPAYHYGTHYSSAMIVASYL
IRMEPFTQIFLRLQGGHFDLADRMFHSVREAWLSASKHNMADVKELIPEFFYLPEFMLNS
NNFDLGAKQNGIRLGDVLLPPWAKGDPREFIRVHRQALECDYVSSHLHEWIDLIFGFKQQ
GPPAVEAVNVFHHLFYEGQVDIYNINDPLKETATIGFINNFGQIPKQLFKKPHPPKRVRS
KSNGEMAGGMPVSLSSTTDKIFFHHLDNLRPSLAPVKELKEPVGQIVCTEKGILAVEQNK
VLQPPVWNKTFAWGYADLSCRLANYESDKAVVVYECLSEWGQILCAICPNPKLVITGGTS
TAICVWETGTSKERAKTLTLKQALLGHTDTVTCLTASSAYHILVSGSRDRTCIIWDLNKL
SFVTQLRGHRAPVSALCINELTGDIVSSAGTYIHVWSINGSPIASANTFTGRSQQILCCC
VSEMNEWDTQNVIVTGHSDGVVRFWRMEFLQVPETPAPEPIEPPDVTDCCTEDKLAEGPE
SQNADDDSSESDGDEPCLSTESKPSPLPNAAAGGGAGSVGGGSGSQPGSTVHRPKVPLGP
GAAGVRTGASWSVDSGSDDSRRWSDTLSLDEKDGFVFVNYSEGQTGQTPLKPGVHPHPQL
HPPHPIAGHGGVPQPIHPTTMEARPYNQLRAGYRWERQLVFRSKLTMHTAFNRKDNAQPA
EITSLAISKDHSKILVGDGRGRVFSWSVSDQPGRSAADHWVKDEVVDSCSGCTVRFSLTE
RRHHCRNCGQLFCQKCSRFQSEIKRLKISSPVRVCQNCYYNLQHERSAEDGCRN
NT seq
6105 nt
NT seq
+upstream
nt +downstream
nt
atggcagagaagagtagctggacggtcgtctttctgggccagttcactccgcaggagagg
acaagtaatgatgaagactttgggggtcttctgtcggccaacctgatcctgttgaggaac
agactgctcgacatcctcctcaaactgctcttcacatccaaggagaaatgcaccgtcaac
gcacaggcatgtgaggagttggtgcgtaccctgggctttgactgtgttgtgtgtagcctg
actgctctctgtccccccctacaggacatggcatgtgaggagttggtgcgtaccctgggc
tttgactatgttgtgtgtagcctgactgctctctgtccccccctacagggcatggcatgt
gaggagttggtgcgtaccctgggctttgactgtgttgtgtgtagcctgactgctctctgt
ccccccctacagggcatggcatgtgaggagttggtgcgtaccctgggatttgactggttg
ttaatgttcacggaggagcacctccactccagcagtgtaacagcagctctgtggatcctg
gtggttctgctcagtaaccagcccatactgaccaggttcaaagagggactgaccggaggc
gaatggctggaccacactgactctgtcctcaccaacaagatcggcaccgtgatgggcttc
aacgtgggacgcagcgccggcggtcgctccacgctacgggagatcaaccgagacgcctgc
catttcccagggttccctgttctgcagactctgctgccgaaacacaccaacgtccccgag
ctctacttcctgctgatggctctgttcctgcaacaacccgtcacagagctgccagacagc
ctccagtttgacctggactctatctggacctttatcttcggggtccctgcttccagcggc
accatagtgggatccatccacagtgtctgcaccgaggctggcttcctgctactggggatg
ctgaggagcatgctcaacctgccgtggcagtctgaggaagagggttcgtggctgagggag
tacccggtgactctgatgcagttcttcaggtacctgtatcacaacgtcccggacctggcc
ccaatgtggcacagcccagagttcctgtgtgtcctggctgcctcagtcttccccttcaac
atcaggccctactctgagatggtgagtgacctggatgatgaagcggggtcaccaacggaa
gaattcaaggccttcaccgccgacacgggcatgaaccgtagccaatcggaatactgcaac
gtgggttctaagacctacctgaccaatcatccggccaagaagtacgtgtttgacttcatg
aaggtgctgatcatggacaacctgtgtctgactccggccagcaaacagacgtccaccata
gacctactgttagaggcgtccccagagcgctccaccaggacacagcagaaagaattccag
tcctacatcctggactctgtcatggaacacctactggctgctgatgtcctcctaggtgag
gatgcatccttgcccatcaccactggagggagctaccaggtgctggtcaacaacgttttc
tacatcacacagcgcgtggtggacaagctgtggcagggcatgttcaacaaggagtccaag
atggtggtggagtttatagtgcagcttataggacagtccaagaggaggtcgcagagtctg
tctctggactcgctctaccactgtctgaaccgtacggtcctgtaccagctgtctcgacct
cacaagaccgtacctcagcaggtagctctgctggactctctacgggtgttgaccgtgaac
cgtaacctggtgctgggaccaggcaaccacgaccaggagtttgtagcctgtttggctcac
tgtttcatcaacctgcacgttgggagtagtgtggagggttttggtttggaggcagaggct
cgtatgacaacctggcacgtcatgatgcccgctgagaatggacctgataacagacacagc
caggaagttagcgaaggtcgccagctactgctgaaggcagtaaaccgtgtgtggacagag
ctgatgcacagtaaaagacccatgttggaggacatctttaaggtgtccctccccaccaac
gacagaggacatgtagatatcagcaccgctcggcctgccctggaggaacctgccctgaag
agctggcagaaccacctggtccatgagaagaagtgtattagcagaggggagtcagtggct
ccggccagccagtccaagctgtctcgggtcagtagtggttttggtctgtccaagctgacc
ggcgctcgacgcaacaagaaggaaaactccctgaacaagaacaacctttctgtacaggag
acgttccagtggatgttcacccacatagcggtggtcagggacctggtggccatgcagtat
aaagagtaccaggagaggcagcagaatgttctaaagtacgtgacagaggagtggtcatct
atagagtatgagctgctgagagagcggggcctctggggcccccccatcggatcccacctg
gacaagttcctgctggagatgacggaggggccctgtcgcatgaggaagaagatggtccgc
aatgacatgttctacatacattatccatacgtccccgagcctgaacccagcgctaacggc
caaataccgaagccggtgcgttaccgccgagcgatcagctacgacagtaaggagtactac
atgagactgctgtcagggaaccctgggatgtaccagcactccatagagcaggacactgag
ggagagaccactcagcatgaacctggagaggtgcacggagaggacaccatcgccagagtc
aaaggtctggtgaaggcccctctgaagaggtcacgctccaccacggacagagctgatgag
gaacaagacctgcttcaggaacagatcttagagtcaggaggactggacgaggaacagagg
acagacaacacatcactgctacgactactggaggagggagagaagatccagcacatgtac
cggtgtgcgcgggtgcagggtctggacactagcgaggggctgctcctgtttgggaaggag
cacttctatgtcatagatggtttcaccatgaccgtcagcagagagatcagagacatcgag
acgctgcccgccaatctgcatgagaccatcatccccagaggtgcgaggcagggtcagagc
cagctgaagaggacctgtagtatctttgcctacgaggacatcaaggaggtccacaagaga
cgatacctgctgcagcccatggctgtggaggtgttctcaggagatgggaggaactacctg
ctggccttccagaaaggagtccgcaacaaggtctaccagaggttcctcgccgtggttccc
tctctggctgacagctcagagtccgtctcaggacagaggcccaacaccagcgtagagcag
gggtctggcctactcagcactctggtaggagagaaatctgtcacccaaagatgggagcgt
ggtgagatcagtaacttccagtatctgatgcatctcaacaccctggctggtcgctcctac
aacgacctgatgcagtaccctgtcttcccctggatcctggctgactacgactctgaggag
ttggacctaaacaacccacggacgttccgtaacctggctaaaccaatgggagcccagacc
gacgacaggctgacccagtacaagaagaggttcaaggactgggaagaccctaccagtgag
accccggcgtatcactacggtacacactactcctcagccatgatcgtggcgtcctacctg
atccgcatggaacctttcactcagatctttctcaggcttcagggaggtcactttgacctg
gctgacaggatgttccacagtgtgcgtgaggcctggctctctgcctccaaacacaacatg
gctgatgtcaaggagctcatccctgagttcttttacctgccagagttcatgctcaactct
aacaactttgacctaggtgccaaacagaacggtattcgactaggagacgtccttctgcct
ccgtgggctaagggagacccccgagagttcatcagagtccatcgacaggctctggagtgt
gactatgtatcatctcatctccatgagtggatcgacctgatctttggcttcaagcagcag
ggtcctccagcggtggaagcggtcaatgtgttccaccacctgttctacgagggacaggtg
gacatctacaacatcaacgaccccctcaaggagaccgccaccatcggcttcatcaacaac
ttcggacaaatccccaaacagttgtttaagaagccccaccctccgaaacgtgtacgtagt
aaatccaacggggagatggcggggggcatgcccgtctctctctcctcaaccactgacaag
atcttcttccatcatctggacaacctcagaccctcactagcccccgtcaaagagctgaag
gagccggttggccagatagtgtgtactgagaagggtattctggctgtggagcagaacaag
gtcctccaacctcctgtctggaacaagacctttgcctggggctacgctgacctctcctgc
agactggccaactatgagtctgacaaggcggtggtggtgtatgagtgtctgtcagagtgg
ggtcagatcctgtgtgccatctgccccaaccccaagctggtcatcaccgggggaaccagc
actgccatctgtgtctgggagacgggcacatccaaggagagggccaagaccctcacactc
aaacaggcattgctgggccatacagacacagtaacctgcctgacagcctcgtcagcgtat
cacatcctggtgtctggctctagagacaggacgtgcatcatctgggacctcaacaaactg
tccttcgtcacacagctcagaggacacagggcccccgtctctgccctttgcatcaacgaa
ctcacgggagacatagtgtcttcggcggggacctacatccatgtgtggagcatcaacggc
agtcccatagccagtgccaacaccttcacaggccgctcacaacagatcctctgctgctgc
gtgtcagagatgaacgagtgggacacgcagaacgtcatcgtcaccggacactccgacgga
gtcgtcaggttctggaggatggagttcctacaagtcccagaaacccctgctccagagccc
atcgagccccctgatgtaactgactgctgtacagaggacaagctggcagagggacccgag
agccagaacgctgacgacgacagcagcgagtcagacggagacgagccctgcctcagcaca
gagtccaaaccctcccctctgcccaacgctgcagccgggggaggagctgggtcggttggg
ggagggtcaggcagccaaccaggcagcaccgtccacagacccaaagttcctctgggtccc
ggtgccgctggggttcggacaggggcctcctggtcagtggacagcgggtcagatgactcc
cgccgctggtcagacaccctcagcctggacgagaaggacggctttgtgttcgtcaactac
tccgagggacagacgggacagacaccactcaaaccaggggtccaccctcacccccagctt
caccctccgcaccccatagcaggccacgggggggtcccccagcccatacaccccaccacc
atggaggcacggccctataaccagctcagagcaggctacagatgggagcgacagctggtg
ttccgtagtaaactgaccatgcacactgcgttcaaccggaaggacaacgctcaaccggcc
gagatcacatccctcgccatctccaaggaccacagtaagatcctggtgggtgatggtcgt
ggcagagtgttcagctggtcggtgagtgaccagcctggtcgttctgctgctgaccactgg
gtgaaggacgaggtggtggacagctgttcaggctgtaccgtgcgcttctccctcacagag
agacgccaccactgcaggaactgtggacagctcttctgtcagaagtgtagtcgtttccag
tctgagatcaagcgtctgaagatctcatccccggtgagggtctgtcagaactgttactat
aacctgcagcacgagcgcagcgctgaggacggatgcagaaactaa
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