Salvelinus namaycush (lake trout): 120062991
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Entry
120062991 CDS
T07522
Symbol
hip1rb
Name
(RefSeq) huntingtin interacting protein 1 related b
KO
K20040
huntingtin-interacting protein 1-related protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120062991 (hip1rb)
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Others
120062991 (hip1rb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANTH
I_LWEQ
HIP1_clath_bdg
Motif
Other DBs
NCBI-GeneID:
120062991
NCBI-ProteinID:
XP_038868979
UniProt:
A0A8U1H1Z0
LinkDB
All DBs
Position
Sna18:1271446..1303450
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AA seq
1068 aa
AA seq
DB search
MNSIRQVPSRVKTKRTETNLGAEREHFDKQQLSSISKAINSNEAPVKEKHARRIILGTHR
EKGAFTFWSYALGLPLSSNSILSWKFCHVVHKVLRDGHHNSLQDCMRHHSNIVETGQLWG
NLHDRYGQLVALYAKLLCTKMEFHVKHSEIRANLEVTDEVLERVAGTDINNVFQLTVEVF
DYLDTELRLAETVIRQLNTSIAISTLTSGQCRLSPLIQVIQDCSHLYHFTVKLLFKLHAC
LPADTLQGHRDRFHDQFHSLKTFFNKARDMMYFKRLIQIPKLPESPPNFLHAASLAKHAR
PVVVIPDEDEPEQVDDDDDDPEPLINVSDVTMPSMAVPQQFDIFDQTFGPANGGFDDRDI
QIENLKRDLELLRTDLERVKGEAQRYITQLKSQINSLEAELEEQRVQKQRALVENEQLRM
ELEATRRRNAEHESVQATFGEAETRAQATEQRYNKLKEKHTELVSSHAELLRKSADTVKM
LSATQQTQEEVERTKQQLAFEVDRIKQDADMKLEEQKFEMEKLKREFEEKKAEVERVKGT
LQSNEKVGEQQTRSMSALQAEKERLMHSVSEKEAALSALRHAAQLQQSSLQQERERSTRE
LGELQGRLQEKSSREEQLQQKLLEEQFSLLQGTVSEAESIIQDAVAKLDDPLHIRCTSSP
DYLVSRAEATLGSIDKVKRGHSDYLTNMGDVGGLLRALTQFSHLAADTIINGSATAHMAP
TDHADRLTENCRGCATQSLQFLKDLKSKASLQRADPASIRIVVQKILRLGKELRPKGVDV
RQDELGDLVDKEMAATSAAIEEAVRRIDEMMNQARKDTSGVKLEVNERILYSCTDLMKAI
HLLVLTSTDLQKEIVEGGRGAATIKEFYARNSRWTEGLISASKAVGWGATQMVESADKVV
LHTGKYEELIVCSHEIAASTAQLVASSKVKADRNSTKLTALQQASRRVNEMAANVVASTK
TGQENLEDKDTMDFSGMSLIKLKMEEMESQVKVLELENQLGNERLRLGELRKKHYDIAGV
PAADLSEGNGLAPSSASEPSSPKPSKPSIMRKPALAQKPNLPPKNMFR
NT seq
3207 nt
NT seq
+upstream
nt +downstream
nt
atgaattccatacgacaggtgccttcaagggtgaaaacaaaaaggaccgaaacgaattta
ggtgctgagagggaacattttgataagcagcagctcagcagcatcagcaaagccatcaac
tccaatgaggcgcctgtgaaagagaaacatgcacgccggatcattctggggacccacaga
gagaagggagcctttaccttctggtcctatgccttgggcctccctttgtccagcaactcc
atcctcagctggaagttctgccacgtggtgcacaaagtgctgcgggatggccaccataat
agccttcaggactgcatgagacatcacagtaacatagttgaaacagggcaactatggggc
aaccttcatgacagatatggccagctggtggctctgtacgctaagctcctctgcacaaag
atggagttccacgtgaagcattctgaaatccgagccaacctagaggtaacagatgaggtt
ctggagcgcgttgcaggaacagacatcaataatgtgttccagctcactgtggaagtgttt
gattacctggatacagagctgaggctagccgagacagtgatccggcagctcaacacgtcc
attgccatctctacgctgacgtcaggccagtgtcgcctgtcccccctcatccaggtcatt
caggactgcagtcacctctaccacttcaccgtcaagctgctcttcaagctgcacgcttgt
ctcccagcagacaccctgcaaggacatcgtgatcgtttccatgaccagttccacagcctc
aagaccttcttcaacaaagccagagacatgatgtacttcaagagactcatccagatcccc
aagctgccagaatcccctcctaatttcctgcatgcggcttccctggccaagcatgcgagg
ccggtggtggtcatcccagacgaggatgagcccgagcaggtggatgatgacgatgacgac
cctgaaccgctgatcaatgtcagtgacgtcaccatgcccagcatggcggtgccacagcag
ttcgacatatttgatcaaacctttggacctgccaatggtggttttgatgacagggatatt
cagattgagaacctcaagcgggatttggagctattgaggacagatctggaaagggtcaaa
ggagaggcccagcgctacatcactcagcttaagtcccagatcaacagtctggaggcggag
ctggaggagcagcgggtgcagaaacagcgtgccttggtggagaacgagcagctgcgcatg
gagctggaggccacgcgccgccgcaatgctgagcacgagagcgtgcaggccaccttcgga
gaggctgagacgagagcccaggccacagagcagcgctataacaagctgaaggagaagcac
actgagctagtgtccagccatgcagaactgctcaggaagagtgcagacacagtgaagatg
ctgtcagccacccagcagactcaggaggaggtggagaggaccaagcagcagttggctttt
gaggtggatcgcatcaaacaggacgctgacatgaagcttgaggagcagaagtttgagatg
gagaagcttaaaagggagtttgaggagaagaaggcagaagtggaacgtgttaaaggcact
ctgcagagcaacgagaaggtgggggaacagcagaccagatccatgtccgcgctgcaggcg
gagaaggagcgactgatgcactctgtgagtgagaaggaggcagcactgtcagccctgcgc
catgctgcacagctgcagcagtcgtccctgcagcaggagagggagaggagcaccagggag
ctgggagagctgcagggcaggctgcaggagaagtctagccgtgaggagcagctgcagcag
aagctgctggaggagcagttctctctgctgcagggaacggtctctgaggctgagagcatc
atccaggatgctgtggccaaactggacgaccccctgcacatccgctgcaccagctcccca
gattacctggtcagtcgggcagaggccactttaggctccattgacaaagtgaaaaggggt
cactcagactacctgacgaacatgggagatgttggtgggctgctgagggccctgacccag
ttctcccacctggctgctgacaccatcatcaacggcagtgccacagcgcacatggctccc
accgaccacgccgaccgtctgactgagaattgcaggggctgtgccactcaaagtctgcag
ttcctgaaggacctcaagtccaaggcctctctccagagggcagatccggcctccattcgc
attgtggtccaaaagatcctgaggctggggaaggagctgcgacctaaaggtgtggatgtg
cgacaggatgagctgggagatctggtggacaaggagatggcagccacatcagcagccatt
gaggaggcagtgcgcagaatcgatgaaatgatgaatcaggcacgaaaggacacctctggt
gtcaaacttgaggtcaatgaaagaatcctctacagctgcacagacctgatgaaggccatc
catctactagtcctgacatcaaccgacctacagaaggagattgttgagggagggaggggt
gcagccactattaaggaattctacgccaggaactcccgttggactgagggactcatctct
gcctccaaagctgtgggatggggagccacacagatggttgagtccgctgataaagtggtg
ctgcacactggtaaatatgaggagctcatcgtctgctcacacgagatcgctgctagtaca
gcacagctggttgcttcctccaaggtaaaggcagaccgcaacagtacgaaactgacagct
ctccagcaggcttctcgccgtgtgaacgagatggcagccaacgtggtggcctccaccaag
acaggccaggagaacctggaggacaaggataccatggacttctctggaatgtccctcatc
aagttaaaaatggaggaaatggagtcgcaggtgaaggtgttggagctagagaatcagctg
ggtaatgagcgtctacgtctgggagagctcaggaagaagcactatgatatagcaggtgtt
ccagcagcagacctctcagagggcaatggcctggccccctcatctgcctctgagccctcc
tcacccaaaccctccaagcctagcattatgaggaaacctgccttggctcagaaacccaac
ttaccacctaaaaatatgttcaggtag
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