KEGG   Salvelinus namaycush (lake trout): 120063027
Entry
120063027         CDS       T07522                                 
Name
(RefSeq) ataxin-2-like isoform X1
  KO
K23625  ataxin 2/2L
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120063027
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     120063027
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 120063027
NCBI-ProteinID: XP_038869058
UniProt: A0A8U1H1Y4
LinkDB
Position
Sna18:3844188..3875265
AA seq 1061 aa
MSMKQAGGNRKPGGGAAAGAGRQNLGRGRHSAKGTSAAVVFNGVYANMRMVHVLTSVVGS
KCELKVKNGLVYDGVFKTYGPECDLVLDAAHRKIPKPSEGPRQEDIVESIIFKASDVVVV
HFRDVDLNFASKISTDTDNFTDTAVSGRINGEHKEKDLEPWDGGEQQQHVVSGSLESLDT
DVSNGWDPNDMFKYNEEQYGIMSTYDSSLSTYTVALERDNSEEFLKREARAAQLAQEIEA
SATYKARVALENDERTEEEKYSAVVRGEREPHTLNRENKYIPPGQRNREGMSWGVGRQNS
PKLVQSSSGPPRPGPHDYSPSSGADQRVVNGGTASWPSPCPSPSLRPPFCYQSGPSLPTR
VATPTRPPSRPPSRASRPSSHPSAHGAPALVSTMPNRRMSSEGPPRMSPKTQRTPRTHRV
PPGGRVPPGVDFMPHNAPGEVPVPPPTRSSSSGGTWSSVVSGVHRPRSPRQNRMGGASPG
PSSLPLAQTGTTPVEPATTQSASSPTAASPARDMAATPSAEAKESRVQETRQNSPTANKE
NMKPLESPPSISRPLSKGPPSMAPDHRKQIDNLKKFSVDFRLQSSSNPDPQFEQMMTKPS
PDAAGEKPKELPLDKGLEGSEEGAVAPTGSSKTGSPGAPSSSTLCPATEQKRGPDVTSQG
VQTSAPTFSGGAKPEDKEEKEPVKDQIMTSTLNPNAHEFKPRVFNTQPKPATTPTPPRPQ
GQPSPSIVVQQPQQVYSQTVCFPQMYPLTPVSPGVQSPAMYHVQMPHMTVSQSKPYRPGK
VANMPQQRSDQHHPQGTPTMMHPAQAAGQPIVAQSPTYSAQYFTCSPQQFTSQQLMQQMP
HYQSQAQHVFSPVMQSQARMMAPPNHGQPGQLVSSSTTQYGEQTHTMYVSQGPMPQQYQH
PQPSVTPTGQAQQGGQHGGNHPAPSPVQQHQAAAAQALHMGNQPQQQMYQALAPTPPSMT
PGTNPQSPQGSFPSAQQAVYLHPQQMQHGYNPSHMAHMQQAHMQSGMVPSHPGHPQMMLM
ATQQPGGHQPQLPQNALNPIPVSSTTHFSYLAHPQVQQHHQ
NT seq 3186 nt   +upstreamnt  +downstreamnt
atgtcaatgaagcaggccggtggtaatcgcaaacccggcggtggtgctgccgctggggcc
ggacgacagaatttgggcaggggacggcatagtgccaaaggtacttcggcagcagttgtc
ttcaacggtgtatatgcaaacatgaggatggtccatgtcttgacatcagtagtgggatcc
aaatgcgaactgaaggttaaaaatggattggtttatgacggagtgtttaaaacatatggc
ccagagtgtgacctggtcctagatgcagcccacaggaagatccctaagcccagcgagggc
ccgcgacaggaagacattgtggaaagcatcatcttcaaggcttctgacgtggtggtggtg
cacttcagagacgtggacctcaattttgccagtaaaatctctaccgacacagacaacttc
acggatacggcggtgagcggcagaatcaacggggagcacaaggagaaggacctggagccg
tgggatggaggggagcagcagcagcacgttgtctcaggcagcctggagtccctggacaca
gacgtgtctaatggatgggacccgaatgacatgttcaagtacaacgaagagcagtatggc
atcatgtcgacctacgacagcagcctgtctacctacactgttgccctggagcgggataac
tccgaggagttcctgaagcgggaggcacgggcagcccagctggcgcaggagatcgaggcc
agtgccacctacaaggcccgcgtggccctggagaacgacgagcgcaccgaggaggagaag
tactcagctgtggtgcgcggagagcgggagccacacacactcaacagagaaaacaagtac
attcccccgggccagaggaacagagaggggatgtcatggggagtgggtcgtcagaactcc
cccaagttggtccagagcagcagcggacctccgcggccaggtccccatgactacagcccc
agctctggagccgaccagcgggttgtcaacggaggtaccgcctcgtggccatctccctgc
ccatctccctccttgcgtcctcctttttgctaccagtcagggccctctctcccaaccagg
gtggccacacccacccggcctccctccagacctccctcgcgggcttcccggccctcgtct
cacccctccgcccacggcgctccagctctcgtctccactatgcccaatagacgcatgtcc
tccgaaggccctcccagaatgtcaccgaagacacagcgcaccccacgcacccacagagtt
ccccctgggggtagagtccctccgggagtagacttcatgccccacaatgctccaggagag
gtgcctgtgcccccgccaacccgcagcagctcttccggtggcacctggtcttccgtggtc
agcggagtacacaggcctcgctcccctcggcagaacagaatgggcggggcctcccctggc
ccttcctccctccccttggcccagactgggaccacccccgtagaacctgctaccacacag
tcagcctcatcacccactgctgctagccccgcccgggatatggccgccactccctcagca
gaggcaaaagagtctcgggtccaggagacgagacagaactcccctacggccaacaaggag
aacatgaagcctctggagagcccccctagtatcagcagacccctctctaaaggacccccc
tccatggcaccagaccacagaaaacaaatagacaacttaaagaaatttagtgtcgatttt
aggttgcagtccagctctaacccagatccacagtttgagcagatgatgaccaagccttca
ccagatgccgcgggagaaaagcccaaggagcttcctttggacaagggtttggaggggtct
gaggagggcgctgtggcccccaccgggagcagcaagacaggcagccctggagcaccatcc
tcctctaccctctgtcctgccacggagcagaagagggggcctgacgtgacctcacagggt
gtccagacatctgcacccaccttcagcggaggggccaagcctgaggacaaagaagaaaag
gagccagtcaaagatcaaatcatgacgtcgactctcaatcctaatgcccatgagttcaaa
cccagggtgttcaatactcagcccaagccggccaccactccaacccccccgcgaccccag
ggccagcccagcccctccatcgtggtgcagcagccccaacaagtctacagccagacggtc
tgcttcccccagatgtaccctctgaccccagtcagccctggagttcagtctccagcgatg
taccatgtccagatgcctcatatgacggtgagccagtccaagccctacagaccaggtaaa
gtagccaacatgccccagcagaggtcagaccagcaccacccccagggcacacccaccatg
atgcacccggcccaggccgcggggcagcccattgtggcccaaagccccacctattcagcc
cagtacttcacctgcagcccacagcagtttaccagccagcaactgatgcagcagatgccc
cactaccagtcacaggctcagcatgtgtttagcccggtgatgcagagtcaggccaggatg
atggcccctcccaaccacggccagcccggccagctggtctcctcctccaccacccagtat
ggcgagcagactcacaccatgtatgtgtcacaaggccccatgccgcagcagtaccagcac
ccccaaccctcggtcacgcccacaggccaggcccagcagggcgggcagcatgggggaaac
cacccggctcccagccccgtccaacagcaccaggctgcagccgcccaggccctgcacatg
ggcaaccagccccagcagcagatgtaccaggccctggcccccaccccgccctccatgacc
ccggggaccaacccccagtccccccagggcagcttcccctcggcccagcaggccgtctac
ctccacccccagcagatgcagcacggctacaacccctcccacatggcccacatgcagcag
gcccatatgcagtctgggatggttccctcccacccaggccaccctcagatgatgctgatg
gccacccagcagccaggcggccaccagccccaactcccccagaacgccctcaaccccatc
ccggtgtcctccactacacacttctcttacttggcacacccccaagtgcaacagcaccat
cagtag

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