Salvelinus namaycush (lake trout): 120063073
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Entry
120063073 CDS
T07522
Name
(RefSeq) ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120063073
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120063073
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
120063073
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
HECT type E3
120063073
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
120063073
NCBI-ProteinID:
XP_038869133
UniProt:
A0A8U1H227
LinkDB
All DBs
Position
18:10940806..10959073
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AA seq
1065 aa
AA seq
DB search
MFSAAQSSKSEFLDKARQAREERKGYKARDRAATLIQALVRRFLCRCRLQKQIRKEVDDL
FQDAGTTKRNALSIFKIARKLLFIFCQDDKLRFEKLCRSILGSMDVENEPKVWYVSLALS
KDLTIPWIKQIKDVLWISCQFLKKLKPDIMQDNKLVTLYLTMLVTFTDTSTWKIVRGKGE
ALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAVFTLALRPVIAA
HFSDNLLRSLLLHIMSVPAVVSHIYTITPECMTTIQTHDLLRKFILFLSREEQCVDICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVTELTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIRTLFSDVLSKKLETQEPTPPPQPTTSQNN
LPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVKKVCSICVLYQTALTTLTQIRLQILT
GLTYLDDLLPKLWAFICELGPQGGLKLFIECLNNDTEESKQLLAMLMLFCDCSRHLITIL
DDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENATGEKLDLFHSVHGWLMVLYE
RDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNIVTK
EKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVDEA
GIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPTSYIHENHLQLFEFVGKMLG
KAMYEGIVVDVPFASFFLSQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVGDL
GLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFIRGF
RSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILSSD
FSSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRK
KEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcagctcagagttccaagtctgagttcctggacaaagccaggcaggcgcgt
gaggagaggaaggggtacaaagcaagggacagagcagccaccctaattcaagcgctggtg
aggagattcctctgtcgctgcagactccagaaacaaataaggaaagaagttgatgactta
ttccaagatgccgggaccacaaaaagaaacgcactatccatttttaaaattgcacggaag
ttactattcattttttgccaagatgataagttgagatttgagaagctttgtcgctccatt
cttggcagcatggatgttgaaaatgagcccaaagtttggtatgtgtcattggccctttct
aaagatctcaccatcccttggatcaagcagattaaagatgtcctgtggatctcctgtcag
ttcctgaaaaaattaaagcctgacatcatgcaggacaataagctggtgactctgtacctc
accatgctggtgaccttcacagacacatcaacctggaagatagtgagagggaaaggcgag
gccctcagaccagcattgacccggatctgtgagaacatcatggggcatctcaatcaaaag
ggattttattcaatactgcagattctactcaccaacggattggcacgctccagaccctct
cttaccaagggcacactcacagcagtattcacgctggcattaagacctgtcattgctgct
cacttctctgacaacttgctgaggtctctccttctccacatcatgtctgtcccagcagtt
gtctcccacatctacaccatcaccccagagtgcatgaccaccatccagacccatgacctg
ttgaggaagttcatcctgttccttagccgcgaggagcagtgtgtcgacatctgtgtctgc
ctggaggggagccacacactgtgcttactgggcaacctgattcacctgggctacctcaac
gagaaagtactggaggaggaggccaaccactttgtgacggaactgacggacatgctgtcc
tactgccagagatacgtgtcccagaagaaatctaacctcacccactggcaccctgtcctg
ggctggttctcccaaaccgtagactacggtctgaatgagtccatgccactggtcacgaag
cagctgcagtacctgtggggcatgcctgtgatccggacgctcttcagtgacgtccttagc
aaaaagctggagacccaagagcccacgcctccgccacaacctaccacgtcccaaaacaac
ctgccagtcaagagtctattcaagcgggcatttcagaagtctgcctcagtgcgaaacatc
ctgaagccagttggcgggagacgggtggactccgcagaggttaagaaagtgtgcagtatc
tgtgtactgtaccagacagccctcaccacgctcacccagatacgattgcaaatcctcact
ggcctaacctacctggacgacctgctgcctaagctgtgggccttcatctgcgaactagga
ccccaaggagggctcaagctgttcatagagtgcctgaacaacgacacagaggagtctaag
cagctgctagccatgctcatgctgttctgcgactgctccagacacctcatcacgatcctg
gatgacattgaagtttacgaagagcagatctcgtttaagacggaagagctcgtaaccatc
tcctcgtttctcaacacgtttgtttacaagatggtctgggatggtatcttagagaatgcc
acgggagagaagctggacctgttccacagcgttcacggctggctgatggtgctttacgag
cgggactgcaggaggaggttctcccctgatgacaactggctgcgcaaggatctaaagccg
agccttttgttccaagagctggagaagggcaagaggagagctcagctgttacttcagtac
atcccacacgtcattccacacaaaaacagggtcctgctgttccgaaacattgtcaccaag
gagaaggaaaccttgggattggtggagaccagctccgcctctccgcatgtcacccatatc
accattcgccgctcacggatgttagaggatggttatgaccagctccgccggttgcccgtc
aactccatcaaaggtgtgatccgcgtgaagtttgtcaacgacctgggtgtggacgaggcc
ggcatcgaccaggacggcgtcttcaaggagttcctggaagagatcatcaagaaagtcttc
aatccggcactcaacctctttaagaccaccagtggcaacgagaggctctacccctcccct
acgtcctacatccacgagaaccacctgcagctctttgagtttgtggggaagatgctcggc
aaagccatgtatgagggtatcgtggtagacgtaccctttgcctccttcttcctcagccag
gtcatgggccaccatcacagcactttctacagctccattgacgagctgccctccctggac
tctgagttctacaagaacctcacctccattaagcgctacgacggggatgttggtgatcta
ggactgacgctatcgtatgacgaggatgttatgggacagctggtctgtcatgagctgatc
cctggaggaaagacgatgccagtcaccaatgaaaacaagatcagctatatccacctgatg
gcgcacttccgcatgcacacgcagataaaagagcaaacggcagctttcatccgagggttc
cgcagcatcatcaacccggagtggctgcacatgttctccacccccgaggtccagcgcctc
gtctccggggacaacgccgagatagacctggacgacctcaagaaacacacagtgtactat
ggaggtttccacagcagccatcgggtcatcatctggctgtgggacatcctgtccagtgac
ttctcatctgaggaaagggccatgttcctcaagtttgtcaccagctgttcgagaccaccc
ctcctgggttttgcctacctcaagccccctttctccattcgctgtgtggaggtgtctgat
gatcaggacacgggggacaccctgggcagtgtcctgcggggtttcttcaccatccggaag
aaggagcctggcggccgcctccccacctcatccacctgcttcaacctgctcaagctgcct
aactacagcaagaagagcatcctgcgtgacaagctccgctatgccatcagtatgaacaca
ggttttgagctctcctaa
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