Salvelinus namaycush (lake trout): 120063109
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Entry
120063109 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase ACSBG2-like
KO
K15013
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120063109
00071 Fatty acid degradation
120063109
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120063109
03320 PPAR signaling pathway
120063109
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120063109
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120063109
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120063109
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Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-GeneID:
120063109
NCBI-ProteinID:
XP_038869206
UniProt:
A0A8U1H4R6
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Position
Sna18:complement(14081665..14098196)
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AA seq
774 aa
AA seq
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MSEQEDSIVLNGVPVIEKSSESCVSDIPLGETEQLPPVAKLQQNRNHSSPLVNGGVVDNP
QPNSESESDREGEDSQETTAVEPAMITPASIPEAPAKPPRSPGLEGPQWDPISGASVPLK
LSDVSLAPAEQLWCSFRDQAVKLRMTETGLGCKAPITVHQMFLETVESYGDLPALASKKE
GQWVTLTWREYYQQCQVAAKSFLKLGLERYHGVGILGFNSPEWFISDIGCILAGGFAAGI
YTTNSPEACQYVADNCEANVLVVENHKQLLKILQIKDELPHLKAIVQYKDELQQKLPNLY
TWAEFMKLGEEVPEEQLNAVVDSQRANQCCTLIYTSGTTGNPKGVMLSHDNITWTSNAAG
TMPDLKHGEEVVLSYLPLSHVAAQVNDMWIAMRFAAVTYFAEPDALKGSLGTTLKEVRPT
SFLGVPRVWEKMQEKMKAIGAKSSGMRKRVADWAKSIGLQASYSAMNGENLLPWGFMLAN
NLVFKKVHWAMGLDRCRNCLTGAAPITRETLEYFMSLRLPLYELYGMSESTGPHTISWEN
NFKIMSCGKVVNGCQTKLDKPDEDGNGEICFWGRHVFMGYLNEPEKTEEALDQQGWLHSG
DLGKHDKDNFLFITGRIKELIITAGGENISPVPIEDAVKAETAIISNAMLLGDKLKFLSM
MFTLKCVVDDNGDPTDELTPEALAFCQQRGVVATKASEIIASKEPAIYKAIQEGIERVNA
KANSNAQRVQKWIILERDFSISGGELGPTMKLKRGVVVKMFQEKINAIYGMAQE
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtctgaacaagaggattccattgtcctcaatggggttcctgtcatagagaagagttct
gagagttgtgtgagtgacattcctcttggcgaaaccgaacagttaccaccagtcgccaaa
ctccaacagaacagaaaccattccagtccccttgtcaatggaggagtagtagacaatcca
cagccaaactctgagtccgagtcagatagagagggcgaagacagccaggagacaactgct
gtagaacctgcaatgataaccccagcaagcatacctgaagcaccagccaaaccacccaga
tcacctggactagagggacctcaatgggatcctatctcaggtgcctcggttcccctgaag
ctgtcggatgtgtctctggccccagcggagcagctctggtgctcctttagggatcaggcg
gtcaagctgaggatgactgagacagggctgggctgcaaggcccccattaccgtccaccag
atgttcctggagacggtggagagctatggagacctgcctgcactggcatctaagaaagag
gggcagtgggtcaccctgacctggagggagtattaccagcagtgccaagtggcggccaag
agcttcctcaagttggggctggagcgttaccatggtgtcggtattctgggctttaactct
ccagagtggttcatctcagacattggctgtatcctggctgggggttttgctgcaggcatc
tacaccaccaactcccccgaggcatgtcagtatgtagcagacaactgtgaggccaacgtc
cttgtggtggagaaccacaaacaactcctcaaaatcctccagattaaggacgagcttcca
cacttgaaagctatcgttcagtacaaggatgaactgcaacagaagctgccaaacttgtac
acttgggctgagtttatgaagctgggtgaggaggtgcctgaggaacagctgaatgctgtg
gtggacagtcagagggctaaccagtgttgtacgctcatctacacctctggaaccacaggc
aaccccaaaggggtcatgctgagtcatgacaatatcacttggacttcaaatgcggcgggc
accatgccagatctgaaacatggtgaggaggtggtgttgagctatctgcccctgagccat
gtagctgcccaggtcaatgacatgtggatcgccatgagattcgcagcggtgacgtatttc
gcagaaccagacgccctgaagggctctttggggactactctgaaagaggtgcgccccacc
agtttcctgggagttccccgtgtgtgggagaagatgcaggagaagatgaaagccattggt
gccaagtcctctggaatgaggaaaagagtggcagactgggctaaatccatcggattgcaa
gccagctacagtgccatgaatggagagaacctgttgccatggggcttcatgctggcaaac
aacctggtttttaagaaggttcactgggccatgggcctggaccgctgcaggaactgctta
acaggggccgcacccatcactagggagaccctggagtatttcatgagccttcgcctcccc
ttgtatgagctgtatgggatgagtgaaagcaccggccctcacaccatctcctgggagaat
aacttcaagatcatgagctgtggaaaggtggtgaatggctgccagacaaagttggacaag
ccagatgaggatgggaatggtgagatctgtttctgggggcgtcatgtgttcatgggctac
ctgaacgagccagaaaagactgaggaggccttggaccagcagggctggctgcactctgga
gacctgggcaagcacgacaaggacaacttcctgttcatcacagggaggataaaggagctg
atcataacagcaggaggagagaatatttcacctgtgcccattgaggatgcagtgaaagca
gagaccgccatcatcagcaacgcaatgttgctcggagacaagctcaaattcctctctatg
atgttcacactcaaatgtgtagtcgacgacaacggcgatccaacggacgagttgacccca
gaggccttggcgttctgccagcagcgtggcgtcgtggcaaccaaggcctctgagattata
gccagtaaggagccagctatttacaaggccatccaggagggcatagagcgcgtaaatgct
aaggccaactccaacgcccagagggtccagaagtggatcattttggaaagagacttctcc
atatccgggggagaactgggacctaccatgaagctaaagaggggggttgttgtcaaaatg
ttccaggagaaaatcaatgctatttatggaatggcacaagaataa
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