KEGG   Salvelinus namaycush (lake trout): 120063143
Entry
120063143         CDS       T07522                                 
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
  KO
K18723  nucleoporin GLE1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03013  Nucleocytoplasmic transport
snh03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    120063143 (gle1)
   03015 mRNA surveillance pathway
    120063143 (gle1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:snh03019]
    120063143 (gle1)
Messenger RNA biogenesis [BR:snh03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     120063143 (gle1)
SSDB
Motif
Pfam: GLE1
Other DBs
NCBI-GeneID: 120063143
NCBI-ProteinID: XP_038869256
UniProt: A0A8U1F441
LinkDB
Position
Sna18:16087062..16095604
AA seq 723 aa
MPAESLRWDTLEALKSSPKGRLKYNPDWLEKGEDILSGCNEAPSLSPLSGLILKRLNMSP
RALQKTCSLGSASRDPSPGLSEEAPVSSTSPFPSANAQPTPLSSPLLVPRLKKDTKQQIV
GDEDSAPDASDDLSPVTNPIPPPTISLLSPRATQMEGCIRICEEKHRAKAKMELSLRQEL
QEKLVASVASRESEQLKRFEELMELKQRQEYQSMRDMMDRETQESIGRQEKLKEEHKNRI
KILNLRLREAEQQRLREAEFERQRQVEGRERLRALNAIQEEILQLNQLLEPAAPTQSGPS
PDLTSYSTRANQLCSQVSEVVRMTAEGEFPSVEDMTVAERALHEMRSLIRVMQEAAAQAQ
EKRKKEQEEEEERRKMAVLQAQQEEQKKSAALSAKEKARKKGLQTKAEQSTLKWYQELQD
SANQCAQAFEGLNNTKDIQTKKLRMELQKAATIPVSQISSISGSKLREIFDKIDKLLSGR
SVVSGGKSVSTSQHPNGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPK
VGDLILAHLHKKCPYAVPHYPPMKDGTSVEEYQKILGYRVEDGGVEAQDSFLKRMSGMIR
LYAAIIQLRWPNGSKQGPAPHGLNNGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMT
QYQVQFWKLILLIQEEYLPRIEAVTSQGQAGSVTRLKQFLESSLRSRQIPPPKGQLSSHF
WRS
NT seq 2172 nt   +upstreamnt  +downstreamnt
atgcctgctgaaagtttacgatgggatacattggaggccttgaaaagctcaccaaaggga
agactgaaatacaacccagactggctcgaaaagggggaggatattttgtcaggttgtaat
gaagctcctagcttgtccccactctctgggctcatcttgaagaggcttaacatgagccct
cgagcgcttcagaagacctgctctttgggctctgcttcccgtgacccaagcccaggcctg
tctgaggaggccccagtctcctcaaccagccccttcccttcagccaatgctcagcccact
cccctctcttctccactactggtccccaggttgaagaaagacacaaagcagcagattgtt
ggtgatgaggacagtgccccagatgccagcgacgatctcagtccagtcaccaaccccatt
cccccccccaccatctccctgctgtctcccagggcaactcaaatggaaggatgtatacgc
atttgtgaggagaaacatcgtgccaaagctaagatggagctgagtctgaggcaggagctg
caggagaagctggtggcctcagttgcgagccgtgagtcggagcagctcaaacgctttgag
gagttgatggagctgaagcagagacaggagtaccagagtatgcgggacatgatggacaga
gaaacacaagaaagcattgggcgccaagaaaagttgaaagaagagcacaaaaacagaata
aagatcctgaacctgcgcctgcgggaagcggagcaacagcgtttgcgggaggcggaattt
gagaggcagagacaggtggagggtagggagagactgcgtgctctcaacgccatccaggaa
gagatacttcaactcaatcagctcctggagccggccgcacccacccagtcaggcccctcc
cctgatctcacatcctatagcacccgtgccaaccagctatgctcccaggtgtcagaggtg
gtgcgcatgacagcagagggggagttccccagtgtggaggacatgacggtggcagagcgg
gcactgcatgagatgaggtcactgatccgggtgatgcaggaggcagctgcccaggcccag
gagaagaggaagaaggagcaggaggaggaagaggagcgcaggaagatggcagtgctgcag
gcccagcaggaagagcagaagaagagtgcagctctgtcagccaaagagaaggcacggaaa
aagggcctgcagactaaagccgagcagagcactctgaagtggtaccaagagctgcaggac
tccgctaaccagtgtgcacaggcttttgaaggcttgaacaacactaaggatatccagaca
aagaaactaagaatggagctccagaaggcagccacaatccctgtcagccagatctccagt
atctcgggttccaagctcagggaaatatttgacaagattgacaagctgttgtctgggaga
tcagtggtatccggagggaagtctgtctccacctcccagcatcccaacggcctggacttt
gtcagctacaaactggccgagaagtttgtgaaacaaggagaagaggaggtggcgtcccac
cacgaggcagccttccccatcgctgtggtggcctccggggtgtgggagcttcaccccaaa
gtcggagacctcatcctcgcccaccttcataagaaatgcccctacgccgtgccccactac
ccacctatgaaggatggcacatctgtagaggaatatcagaaaatcttaggctaccgtgtg
gaagatggaggggtggaggctcaggacagctttttgaagaggatgtcaggaatgatccgc
ctctatgctgctatcatacagctccgatggcctaatggctccaagcaggggcctgcccca
catgggctgaacaacggctggcgctggctggctcagatgctgaacatggagcccctggca
gacgttacggcaacactcctttttgacttcctagaggtctgtggcaacgccctgatgacg
cagtatcaggttcagttttggaagctcattctgctcatccaagaggaatacttgccaagg
attgaagctgtcaccagccaagggcaggcgggctcagtcacgaggcttaagcagttcctg
gagagttcattaagaagcaggcagatccctccccccaaaggccagctgagctcccacttc
tggagatcctga

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