Salvelinus namaycush (lake trout): 120063143
Help
Entry
120063143 CDS
T07522
Symbol
gle1
Name
(RefSeq) nucleoporin GLE1 isoform X1
KO
K18723
nucleoporin GLE1
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh03013
Nucleocytoplasmic transport
snh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
120063143 (gle1)
03015 mRNA surveillance pathway
120063143 (gle1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
snh03019
]
120063143 (gle1)
Messenger RNA biogenesis [BR:
snh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
120063143 (gle1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GLE1
Motif
Other DBs
NCBI-GeneID:
120063143
NCBI-ProteinID:
XP_038869256
UniProt:
A0A8U1F441
LinkDB
All DBs
Position
Sna18:16087062..16095604
Genome browser
AA seq
723 aa
AA seq
DB search
MPAESLRWDTLEALKSSPKGRLKYNPDWLEKGEDILSGCNEAPSLSPLSGLILKRLNMSP
RALQKTCSLGSASRDPSPGLSEEAPVSSTSPFPSANAQPTPLSSPLLVPRLKKDTKQQIV
GDEDSAPDASDDLSPVTNPIPPPTISLLSPRATQMEGCIRICEEKHRAKAKMELSLRQEL
QEKLVASVASRESEQLKRFEELMELKQRQEYQSMRDMMDRETQESIGRQEKLKEEHKNRI
KILNLRLREAEQQRLREAEFERQRQVEGRERLRALNAIQEEILQLNQLLEPAAPTQSGPS
PDLTSYSTRANQLCSQVSEVVRMTAEGEFPSVEDMTVAERALHEMRSLIRVMQEAAAQAQ
EKRKKEQEEEEERRKMAVLQAQQEEQKKSAALSAKEKARKKGLQTKAEQSTLKWYQELQD
SANQCAQAFEGLNNTKDIQTKKLRMELQKAATIPVSQISSISGSKLREIFDKIDKLLSGR
SVVSGGKSVSTSQHPNGLDFVSYKLAEKFVKQGEEEVASHHEAAFPIAVVASGVWELHPK
VGDLILAHLHKKCPYAVPHYPPMKDGTSVEEYQKILGYRVEDGGVEAQDSFLKRMSGMIR
LYAAIIQLRWPNGSKQGPAPHGLNNGWRWLAQMLNMEPLADVTATLLFDFLEVCGNALMT
QYQVQFWKLILLIQEEYLPRIEAVTSQGQAGSVTRLKQFLESSLRSRQIPPPKGQLSSHF
WRS
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcctgctgaaagtttacgatgggatacattggaggccttgaaaagctcaccaaaggga
agactgaaatacaacccagactggctcgaaaagggggaggatattttgtcaggttgtaat
gaagctcctagcttgtccccactctctgggctcatcttgaagaggcttaacatgagccct
cgagcgcttcagaagacctgctctttgggctctgcttcccgtgacccaagcccaggcctg
tctgaggaggccccagtctcctcaaccagccccttcccttcagccaatgctcagcccact
cccctctcttctccactactggtccccaggttgaagaaagacacaaagcagcagattgtt
ggtgatgaggacagtgccccagatgccagcgacgatctcagtccagtcaccaaccccatt
cccccccccaccatctccctgctgtctcccagggcaactcaaatggaaggatgtatacgc
atttgtgaggagaaacatcgtgccaaagctaagatggagctgagtctgaggcaggagctg
caggagaagctggtggcctcagttgcgagccgtgagtcggagcagctcaaacgctttgag
gagttgatggagctgaagcagagacaggagtaccagagtatgcgggacatgatggacaga
gaaacacaagaaagcattgggcgccaagaaaagttgaaagaagagcacaaaaacagaata
aagatcctgaacctgcgcctgcgggaagcggagcaacagcgtttgcgggaggcggaattt
gagaggcagagacaggtggagggtagggagagactgcgtgctctcaacgccatccaggaa
gagatacttcaactcaatcagctcctggagccggccgcacccacccagtcaggcccctcc
cctgatctcacatcctatagcacccgtgccaaccagctatgctcccaggtgtcagaggtg
gtgcgcatgacagcagagggggagttccccagtgtggaggacatgacggtggcagagcgg
gcactgcatgagatgaggtcactgatccgggtgatgcaggaggcagctgcccaggcccag
gagaagaggaagaaggagcaggaggaggaagaggagcgcaggaagatggcagtgctgcag
gcccagcaggaagagcagaagaagagtgcagctctgtcagccaaagagaaggcacggaaa
aagggcctgcagactaaagccgagcagagcactctgaagtggtaccaagagctgcaggac
tccgctaaccagtgtgcacaggcttttgaaggcttgaacaacactaaggatatccagaca
aagaaactaagaatggagctccagaaggcagccacaatccctgtcagccagatctccagt
atctcgggttccaagctcagggaaatatttgacaagattgacaagctgttgtctgggaga
tcagtggtatccggagggaagtctgtctccacctcccagcatcccaacggcctggacttt
gtcagctacaaactggccgagaagtttgtgaaacaaggagaagaggaggtggcgtcccac
cacgaggcagccttccccatcgctgtggtggcctccggggtgtgggagcttcaccccaaa
gtcggagacctcatcctcgcccaccttcataagaaatgcccctacgccgtgccccactac
ccacctatgaaggatggcacatctgtagaggaatatcagaaaatcttaggctaccgtgtg
gaagatggaggggtggaggctcaggacagctttttgaagaggatgtcaggaatgatccgc
ctctatgctgctatcatacagctccgatggcctaatggctccaagcaggggcctgcccca
catgggctgaacaacggctggcgctggctggctcagatgctgaacatggagcccctggca
gacgttacggcaacactcctttttgacttcctagaggtctgtggcaacgccctgatgacg
cagtatcaggttcagttttggaagctcattctgctcatccaagaggaatacttgccaagg
attgaagctgtcaccagccaagggcaggcgggctcagtcacgaggcttaagcagttcctg
gagagttcattaagaagcaggcagatccctccccccaaaggccagctgagctcccacttc
tggagatcctga
DBGET
integrated database retrieval system