KEGG   Salvelinus namaycush (lake trout): 120063185
Entry
120063185         CDS       T07522                                 
Name
(RefSeq) splicing factor 3A subunit 1-like
  KO
K12825  splicing factor 3A subunit 1
Organism
snh  Salvelinus namaycush (lake trout)
Pathway
snh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:snh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120063185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:snh03041]
    120063185
Spliceosome [BR:snh03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120063185
 Complex B
    120063185
 Complex C
   U2 SnRNP specific factors
    120063185
SSDB
Motif
Pfam: PRP21_like_P Surp ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 120063185
NCBI-ProteinID: XP_038869321
UniProt: A0A8U1F3X2
LinkDB
Position
Sna18:complement(17373504..17387619)
AA seq 787 aa
MPPGPVQLVQLEPNSKADEPTGETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKGQEPSAAVPKVMQQQALLNSQQLP
QKAQVIHETVVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQR
NYQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLMKLKREAENPREVLDQVRYRVEWAK
FQERERKKEEEEREKERVSYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILTQ
ERYDKFGESEEVEMEVESEDEDDVEQEDRDDGRPTQPDQDTQLQDMDEGSDEEDDGKAPL
PPDNPMPPPLPPTPDQVIIRKDYDPKASKPQPPAKTLDEFLISPITGERIQASKMQEHMR
IGLLDPRWLEQRDRGIRERQIEDEVYAPGMDIESSLKQLAERRTDIFGVEETAIGKKIGE
EEIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVQEDESKEKIGPSKP
ELYHHHQSPLISSSPLLPKPNPPMNTIARAPPSMLPPVRTTLLSAVPVIPRPPMAPVQMR
LASGQVLTPMPPMMHAPRINVVPMPQPPHMMAPRPPPMVVPTAFVPAPPVPQPPRPRPDP
QPPSQPPQPHNDEPASKKMKTEDNLMPEEEFLRRYKGSVSVTVQVPNMQDKTEWKLSGQA
LNFTIPLTDQVSVIKVKIHEATGMPAGKQKLQYEGIFIKDSNSLAYYNINNGSVIHLALK
ERGGRKK
NT seq 2364 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgtacaacttgttcagcttgagcccaacagcaaggcagatgagcct
acaggggaaaccccagcaacgaaacccatagttgggatcatctatccacctcctgaggtc
cgaaacatcgttgataagactgccagctttgttgccaggaatggaccagagttcgaagca
aggatccgtcagaatgagatcaacaacccaaagttcaacttcctgaaccccaatgacccc
taccatgcttactatcgccacaaagtcaatgaattcaaggagggcaagggccaggagccg
tctgcggccgtgccaaaggtcatgcagcagcaggccctgctgaactcgcagcagcttcct
caaaaggcccaggtgattcatgagacagtggtgccaaaggagcctccgcccgagtttgag
ttcattgctgaccctccttcaatctcggcattcgacctggatgttgtcaagctgaccgcc
cagtttgtggctcgcaacgggcgccagttcctcacacagctcatgcagaaagaacagcga
aactaccagtttgacttcctgcgacctcaacacagcctcttcaactacttcaccaagctg
gtggagcagtacacgaagattctgatccctcccaagggactgctgatgaagctgaaaaga
gaggctgagaaccccagggaggtgctggaccaggtgaggtaccgcgttgagtgggcgaaa
tttcaggagcgtgaaaggaagaaggaggaggaggagcgggagaaagagcgtgtgtcctac
gcccaaattgactggcatgactttgtagtggtggagaccgtggacttccagcctaatgag
caaggccactttcccccacccaccacacctgaggagctgggagctcgcatcctgacccag
gagcgttatgacaagtttggagagagcgaggaggtggagatggaggttgaaagtgaggac
gaggatgacgttgagcaggaggatcgggatgatgggcgtcccacacagcctgatcaggac
acacagctgcaagacatggatgagggttctgatgaagaggatgatggcaaggcaccattg
cccccagacaaccccatgccacccccactgccccctactccagaccaggtcattatccgc
aaggactacgaccccaaagcttccaagccccagcctccagccaagactctggatgagttc
ctcatctctcccatcacgggtgagaggatccaagccagtaagatgcaggagcacatgcgc
attggactactggatccccgctggctggagcagagggaccgcggcattagagagaggcaa
atcgaggacgaggtttacgcccctggcatggacattgagagcagcctaaaacagctggct
gagaggcgtactgatatctttggtgtggaggagacagccatcggtaagaagattggagaa
gaggagatccagaagcctgaggagaaggtgacctgggatgggcactctggcagcatggcg
cgtactcagcaggcagcacaggccaacatcaccctacaagagcagattgaggccattcac
aaggccaagggactggtgcaggaggatgaaagcaaagagaagattgggccgagcaagcct
gagctttaccatcatcatcaatcaccccttatctcctcttccccccttctgcccaaaccc
aaccctccaatgaacacgattgctcgggcccctccttccatgctgccccctgtacgcacc
actctcctgtcagctgtgcctgtgattccacggccccccatggcccctgtgcagatgcgc
ctagcctcagggcaggttctaacacccatgccccccatgatgcatgctccccgcatcaac
gtggtgcccatgccccaaccacctcacatgatggcccccagaccaccacccatggtggtc
ccaactgcatttgtccctgcccctccagtcccgcagcccccccgcccccgccctgacccg
cagccaccttcccagccaccccaaccccataatgatgagcctgccagcaagaagatgaag
acagaggacaacctcatgccagaggaggagttcctccgcagatacaagggttcagtgtcg
gtcacagtgcaagttcccaacatgcaggataagactgaatggaagctaagtggacaagcg
ctcaatttcactatcccactcacagatcaggtgtctgttattaaagtaaaaatccatgaa
gccactggaatgccagccggaaagcaaaagctacagtatgagggaattttcatcaaagat
tccaactcgctggcttactacaacataaacaacggttcagtcatacacctggcactgaag
gagagaggtgggagaaagaagtga

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