Salvelinus namaycush (lake trout): 120063186
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Entry
120063186 CDS
T07522
Name
(RefSeq) E3 ubiquitin-protein ligase DTX1-like isoform X1
KO
K06058
deltex [EC:
2.3.2.27
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120063186
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120063186
Enzymes [BR:
snh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120063186
Ubiquitin system [BR:
snh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120063186
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DTC
WWE
zf-RING_UBOX
WWE_5
zf-rbx1
zf-C3HC4
zf-RING_2
zf-ANAPC11
zf-RING_5
zf-RING_Vps41
zf_RING_Vps8
PHD_NSD
zf-UDP
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
120063186
NCBI-ProteinID:
XP_038869323
UniProt:
A0A8U1F4E2
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All DBs
Position
Sna18:complement(17483060..17550523)
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AA seq
653 aa
AA seq
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MARPGSGVLVSVNGLGYPPQNLARVVVWEWLNEHGRWRPYSAATCHHIENVLKGDVRGTV
VLGQVDAQLASYIIDLQSMHQFRQDTGTMRPVHRNFYEPSSAPGKGVVWEWENDSGSWTP
YDMEICVTIQNAYEKQHPWLDLTSLGFCYLIDFNSMVQTNRQSQRKRRLRRRMDLAYPLI
MGSIPKSQSWPVGASSGQPCSCQQCILVNSTRAASNAILASQRRKLYGGAAGAPGATGTL
NVVRQSNTFAGTTLWSPTSGAGSNNIQHNNISAGSGQAKAEQVQSPLSSSNFPCSPALPS
LPLAHGHSHTHAHSHGHHVIINGQNNLNRPGTQRISMGTARGAIPPGVPALPVKNLTGSG
PVHPAIAGMTGILMCAAGLPVCLTRAPKPILHPPPINKSDMKPVPGVNGIRRKTKKKHLR
KGKNPEDVVRRYTEKVKVAPDEDCTICMERLVMSSGYEGVLQHKGIKPEMVGKLGKCGHI
YHLLCLVAMYNNGNKDGSLQCPTCKAIYGEKTGTQPPGKMDYHVIPHCLPGYLEAKTIRI
VYDIPAGIQATEHPNPGKKFSARGFPRHCYLPDNDQGRKVLKLLIMAWDRRLIFTIDTSS
TTGESDTVVWNEIHHKTEFGSNLTGHGYPDPNYLDNVVTELSAQGVVEDNLKD
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcccaggctctggggtgctggtgtcggtcaacgggctggggtaccctcctcag
aacctggcccgggtggtggtgtgggagtggctgaacgaacatgggcgctggcggccctac
agtgcggcaacgtgccaccacatagagaacgtactgaagggggacgtgcgggggactgtg
gtccttggacaggtggatgcccaactggcctcttacatcatcgacctgcagtccatgcac
cagtttagacaggacacaggcaccatgaggccggtccacaggaacttctatgagccgtcg
tcagccccggggaagggtgtggtgtgggagtgggagaacgacagcggctcctggacgccc
tacgacatggagatctgtgtgaccatccagaacgcctatgagaagcagcacccctggctg
gacctgacctctctgggtttctgctacctcattgacttcaacagtatggtccagaccaac
cggcagagccagaggaaacgccgcctgcgccgacgcatggacctggcctaccctctcatc
atgggctccatccccaagtcccagtcgtggcctgtgggcgccagctccggccaaccctgc
tcctgccagcagtgcattctagtcaacagcacgcgggccgcctccaacgccatcctggcc
tctcagcgccgtaagctgtacggaggggccgcaggagctccaggggccacaggcacgctt
aatgtggtacggcagagtaacactttcgctggaaccacactctggtccccaacctccggt
gccgggagcaacaacatacagcataacaacataagtgcaggaagtggccaagctaaagct
gaacaggtgcagtcgcccctgtctagttccaacttcccttgttccccggcactgccgtcc
cttccgcttgcacatggccactcccacacccatgcacactcccacggccaccatgtcatc
atcaacgggcagaacaacctgaaccggccgggaacccagcgcatttccatgggcactgct
agaggagccatcccaccaggggtcccggccctccctgttaagaacttgactggctctgga
ccagttcacccagcaattgcaggtatgacaggtatcctgatgtgtgctgctggcctgcct
gtgtgtctgacccgggcccctaaacccatcctgcacccgccgcccataaacaagagtgac
atgaagcctgtgcccggggtcaatggcatccgccgcaagaccaagaagaagcacctcagg
aaagggaaaaacccagaggatgtggtgcggagatacacggagaaagtgaaggtagcccct
gatgaggactgcaccatctgcatggagaggctggtgatgtcatcgggctacgagggtgtc
ctgcagcacaagggcataaagccagaaatggtgggcaagcttggcaagtgtgggcacatt
taccatctgctgtgcctggtggccatgtacaacaatggcaacaaggatggcagtctgcag
tgccccacctgtaaggctatctatggggagaagacaggcacacagccccctgggaagatg
gactaccatgtcatcccccactgcctgcccggctacctggaggccaagaccatccgcatc
gtctatgacattcctgctggcatacaggccacagagcatcccaacccagggaagaagttc
agcgctagaggcttcccacggcactgctacctcccagacaatgatcagggcaggaaggtc
ctgaagctcctgatcatggcgtgggaccgccgcctcatcttcaccatcgacacgtccagc
accacgggcgagtcagacacggtggtgtggaatgagatccaccacaagacagagtttggc
tccaatctgacagggcacggctacccagaccccaactacctggacaacgtcgtgacagag
ctgtcagcccagggggtcgtagaggacaacctgaaggactga
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