Salvelinus namaycush (lake trout): 120063190
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Entry
120063190 CDS
T07522
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 48-like isoform X1
KO
K11858
ubiquitin carboxyl-terminal hydrolase 48 [EC:
3.4.19.12
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120063190
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
snh04121
]
120063190
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
120063190
Peptidases and inhibitors [BR:
snh01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
120063190
Ubiquitin system [BR:
snh04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
120063190
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
DUSP
ubiquitin
Usp-48
Motif
Other DBs
NCBI-GeneID:
120063190
NCBI-ProteinID:
XP_038869332
UniProt:
A0A8U1F420
LinkDB
All DBs
Position
Sna2:42468444..42490424
Genome browser
AA seq
1091 aa
AA seq
DB search
MAPRVQLEKAAWRWVESVRPEDIQREHIEIAYRICIPACKRGACRRNCKGNPNCLVGIGE
HAWLGEIDENTFHNIDDPNSERRDKNTFVGLTNLGATCYVNTFLQVWFHNLELRRTLYLC
QNARAEEHNMDSDYEPRSICEHLQYLFALLQNSNRRYIDPSGLVKALGLDTGQQQDAQEF
SKLFLSLLEDTLSKQKNPNLHNVIQQQFCGQMSYVTVCNQCGRASPLPSRFYELELNIQG
HKNLTECVTEFLKEEKLDGDNRYFCESCQSKQNAARRIKLHSLPRVLNLQLMRFVFDRQT
GHKKKLNTFISFPEQLDMGPFLEEKEDEKCVYELSAVLIHRGVSAYSGHYIAHVRDARTS
DWYKFNDEEIEKMEGKKLQLGIEEDIAETVKSQTRKPKCSKGYHCSRNAYMLVYKCQREE
DTDPMETNVEVPGFLGRLVDRDNRKFEEWCLEMADMRKQSVDKGKAKHEEVKELYELLPA
EDGQEYEFVPLEWLKKWLDDSTVTKEIDNGNFLCSHGKLHPDKVGEAKRISVKAAELLFD
KYGGGPRLDCSTLCEECVGQRCRVLRLKNQLAEDYKEVTNLVKCPPKSDEGYWAGKTSLR
SWRQLALEQLEEDEEETKHSNGKTNGEGPEITATKEYGTENLDGDEEEMKTFNEDILCRH
GGLSILESERRLVTEEVWSKLRVYFPKAPQFTQLQEPCQQCLRLEREGKENEALNRMMAS
EQKSSLLNLFQEKNRPTLTKWPQETDILYIVPLFFVDEWRRFIRRPTKTTPVSSVGNSLL
LCPHRGFMFTFDSMLKGDAQHIALLWPDEWEVISRHFLVDQPISICRFGEATPNGSSVEY
TTQPELCRDCREGFIFQQQRDMREYAQATVYVRKVIDDKRLKDAAPEMNVSGSEAEDERE
EPVAKVDGERDPDFSQSEDGAKRQKLSDGTVSAAASPAPMASGGKSGIRRSTRHRKLRGE
KALIVSANQTLKELKIQIMHAFSVAPFDQNLSIDGRCLTDDSATLGSLGVIPESVICLKA
DEPIADFAAMDDVYQVCMPEEGFKEKSTCTRPTCSASQEPLLRCGRGILFTKWDWASWPL
KRTQVAALEAD
NT seq
3276 nt
NT seq
+upstream
nt +downstream
nt
atggcgcctcgcgtacagcttgagaaagcagcctggcgctgggtcgagtctgtgagacca
gaggacatacaacgggaacatattgagatagcttatcgaatctgtataccggcgtgcaag
aggggagcatgcaggaggaattgcaaagggaacccaaattgtcttgtcggtattggtgaa
catgcctggttgggagagatcgacgagaacaccttccacaacattgacgatccaaactcg
gagcgccgggacaagaacacgtttgtgggtctgacaaacctgggtgccacgtgttacgtc
aacacatttctgcaggtgtggttccacaacctggagctgcgtaggaccctgtacctgtgt
cagaacgccagggcagaggagcacaacatggactcagactacgagcctcgcagcatatgt
gaacacctgcagtacctgtttgcactgctacagaacagcaacagaaggtacatcgacccc
tcagggctggtcaaggctctggggctggacacaggacaacagcaggacgctcaagagttt
tccaagctcttcctctcgctattggaggacaccttatccaaacagaagaatccaaacctg
cataatgtcatccagcagcagttctgtggccagatgtcttacgtcactgtgtgtaaccag
tgtggtcgtgcttctcctctgccgtcccgattctacgaactggagctcaacatccagggc
cacaagaaccttacagaatgtgtcacagagttcctcaaggaggagaagttagatggtgac
aaccgctacttctgtgaaagctgccagagcaaacagaacgccgctcgacgcatcaaactg
cacagcctcccacgggtactcaacctgcagctcatgcgtttcgttttcgacagacaaacg
ggtcacaagaagaagctcaacaccttcatcagtttcccagagcagctggacatgggcccg
tttctggaggaaaaagaagatgagaagtgtgtgtacgagctgagtgcggtcctgattcac
cgcggggtcagcgcctactcgggtcactacatcgcccacgtgcgagacgcccgcaccagc
gactggtacaagttcaacgacgaggagattgagaagatggaaggcaagaagctacagctg
ggcatcgaggaggacatcgccgaaacggtgaagtcccagacccgtaagcccaagtgcagt
aaaggatatcactgctccagaaacgcctacatgctggtgtacaaatgccagagagaggag
gacactgaccccatggagaccaacgttgaggtgccaggctttctggggaggctggtggac
cgagacaacaggaagtttgaagagtggtgcctggaaatggccgacatgcgcaagcagagc
gttgacaagggaaaggccaagcacgaagaggtgaaggaactctacgagcttttacctgcg
gaagacggccaagagtatgagtttgtgcctctggagtggctgaagaaatggctggatgac
tcgacggtcaccaaagaaatcgacaacggcaacttcctgtgttctcacggtaaactgcac
cccgacaaggtgggggaggccaagaggatctccgtcaaagctgcagagcttctcttcgac
aaatatggaggaggacccaggctagattgctcaactctctgtgaggaatgtgtggggcag
agatgcagagtgctgcggctaaagaaccagctggccgaggattacaaagaagtcaccaac
cttgtcaagtgcccgcccaaaagtgatgaggggtactgggcgggcaagacgtctctgcgg
agctggagacagttggccttggagcagctggaggaggatgaggaggagaccaaacacagc
aacggcaaaaccaatggagagggaccagagatcactgctactaaagagtacggcacggag
aacctggacggagacgaggaggaaatgaagaccttcaatgaggacatcctctgtcggcac
ggcggtctgagtatcctggagagcgagcggcggctggtgactgaggaggtgtggtccaaa
ctgagggtgtacttccccaaagccccccagttcacccagctacaggagccctgtcagcag
tgcctgaggctggagcgagaggggaaggagaatgaggctctgaacaggatgatggcgtca
gaacagaagagctccctactcaacctcttccaggagaagaacaggcccacactcaccaag
tggccacaggagacagatattctctacatagttcctctgttttttgtggacgagtggaga
aggttcatcaggaggcccactaagaccaccccagtgtctagcgtggggaacagtttgctc
ctatgtccacatagaggcttcatgttcaccttcgactccatgttaaagggagacgcccaa
catatagctcttctctggcccgacgaatgggaggtgattagcagacacttcctggttgat
cagccaatctccatctgccggttcggcgaggctacgcccaacggctccagtgtggagtac
accacccagcctgagttgtgtagggactgcagagaaggcttcattttccagcagcagagg
gacatgagagagtatgcacaagccacagtctatgtacgcaaggtcatagacgacaagagg
ttgaaggatgcagctcctgagatgaatgtgagcgggtcagaggcagaggatgagagggag
gagcctgttgctaaggtggatggagagcgagaccctgatttcagccagtcagaggacggg
gcaaagcgtcagaagctgagtgacggcaccgtcagtgctgccgcaagtcccgcccccatg
gccagtggtggcaaatcggggatcaggaggagcacgaggcacaggaagctccggggagag
aaagcactcatcgtctcagccaatcagacgctcaaggagctcaaaatacagatcatgcac
gccttctccgtggccccgtttgatcaaaacctgtcgatcgacggccggtgtcttacggac
gattctgccaccctcggcagcctaggagtcatcccagagagcgtcatctgtctgaaggct
gatgaacccatagcagattttgcagcaatggatgatgtttatcaggtgtgtatgcctgaa
gaaggatttaaagaaaaatccacctgcacccgccccacctgctcagccagtcaggagccg
ctactgcgttgcggccgtggcatactttttactaaatgggactgggcttcttggccactg
aagagaacacaagtcgctgccctcgaagcggactga
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