Salvelinus namaycush (lake trout): 120063193
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Entry
120063193 CDS
T07522
Symbol
adamts13
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 13 isoform X1
KO
K08627
a disintegrin and metalloproteinase with thrombospondin motifs 13 [EC:
3.4.24.87
]
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
snh01002
]
120063193 (adamts13)
Enzymes [BR:
snh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.87 ADAMTS13 endopeptidase
120063193 (adamts13)
Peptidases and inhibitors [BR:
snh01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
120063193 (adamts13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_CR_3
ADAMTS_spacer1
TSP_1
ADAMTS_CR_2
Reprolysin
Reprolysin_3
Reprolysin_5
TSP1_CCN
Adt-1
Reprolysin_4
TSP1_spondin
Reprolysin_2
Peptidase_M10
DUF6055
Motif
Other DBs
NCBI-GeneID:
120063193
NCBI-ProteinID:
XP_038869335
UniProt:
A0A8U1F4C1
LinkDB
All DBs
Position
Sna18:complement(18853230..18867390)
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AA seq
1549 aa
AA seq
DB search
MAALALLCLLSVLPGSTAILMRSPLEELFLHSLDQKDMVFYFGTDSATSVPEFQLIWTDC
ASTELHTGPWRCSFETEGKRFVLGIGERKQSFSCQSTLETARNTTLKIIRKSHAMCCQQA
KVLHPPSTKGFLTICARKMQGLVVAGKEKERLYIQPVLQKHIHLTEARNCSSPRIPHLVF
HQPFTARGPPRHSHMKRLRRQRSAIMPEVTHLELLVVVAPDVQLVHRQDTERYILTNLNI
ASELLRDMTLGANMRVHLVRMIILSEPEPEINISTNISSSLRSVCEWARRVIPSNDTDPL
HADLVLYITRFDLELPNGNKQVRGVAQLGGACSSQWSCIITEDTGFDLGITIAHEIGHSF
GINHDGIGNTCSSSGFMMASDGGYNSVDLTWSQCSRQQLYTFFSEGKADCVKDLPVLVGS
LQDWKPGLYYGVDDQCRIAFGSTARACSFTNPDLPVCRVLSCHIKPDDNSSCKRLLVPLL
DGTECAPNQWCLKGRCVSPDQLSSSSSAVVHGSWSSWSQFSPCSRICGGGVTSRTRQCNN
PRPAFGGNDCKGRDTEAELCHQQQCERTQLAFMAEQCAQTDLQPLYLSPNTASLYTWIPA
VGFVTGDEQCRYMCQCKGENFIVSRGSQFVDGTRCEPDSPAPLGATTACLGGMCQLFGCD
GVLKSGKVEDVCGVCGGDGSSCSLTSQSYSGGQAREYVTFLTLPVNATQVHIVNRAPVFT
HLAVLIGNQYVVSGSGGIALNITHPSPLEDGRLVYRLYLTPDLLPLMEELLLPGTVTEET
HIQVYRKYGKEYGPQTSPNITYHFYTPISNNAFIKEIPRGKWTVVTTSCSVTCGSGIQKS
MHVCMDEDTKEHLEEVYCDSAPLLLLQQTTCHLPACPPSWETGEFGPCSALCGGGEKVRP
VRCVQRQGADVLQVAVSECPQHPATQSVDTCNFQPCPARWNASEAGECSAVCGPGAAKRV
VTCVRSEGGHDVEVDHSLCSGLFKPPVLVSCVIDVCPIGWESKGQDQPILNKSPGLRYRS
RYLTVYVWSPVIGQCSKTCGNGTLQVWFSCLDHQTRLAVPEVYCDASSKPEPHTESCNPS
PCPPMWRYKQGVCSVSCGGGVAHRVLYCSQETEGDEEVVVNNTECSNMTKPIAVVTCNSN
SCPARWRALRTGACSTSCDLGLARRHVSCVEYIHGEDSEVSEERCHAAVKPATTVPCLVQ
VCTFRWDVKDWNQCSVPCGYGIQSRAVSCMGPTKPEPLSPLLCMHMPKPITIRGCQMDDC
RVLEKTSPLTHTHTTNAPSLETRDLLPSPQGMEVTPMDEELSPTLSLTQTPPTATELITP
AMPTVTPKTSLCGQLLLGESGTVDLRHETGRCILSIGRPLDEVIHMKVESSSLSCKKREY
VAFYDRLVLVRKCDQLEDTELTSRTNVLLVRQHLLSPGNGVLLTYSSQKNNKKSHHQDCD
VQLFAPSGVIENPTMTSALGSHTCRVLINAPPSVKIRIRALSMGPVVNSTAAQSTFIMIR
DVDVLKTNVFKGQQLFDWRSAGNMAEIEFHGEYLQSNGSFRAEYSFVEP
NT seq
4650 nt
NT seq
+upstream
nt +downstream
nt
atggcagccttggcgctgctctgtctgctatcagtgctgccaggctccacagcaatacta
atgagatctccattggaggagctatttctgcactccctggatcaaaaggacatggtgttt
tattttggtaccgactctgctacctcagtgccggagtttcagctcatctggacagactgt
gcctctacggagctccacactggcccctggcgatgctccttcgagaccgaagggaagcgc
tttgtgctggggatcggggagaggaagcagtccttctcctgtcagtccacattagagaca
gctcggaacaccactctcaaaatcataaggaaaagtcatgccatgtgttgtcagcaggcc
aaagttctacatcctccttcaactaaaggatttctcaccatctgtgccaggaaaatgcaa
ggcctggttgttgcaggtaaagagaaggagagactatacattcagccagtgcttcaaaaa
cacattcatctgactgaagccagaaactgttccagtccaagaatacctcatctggtgttc
caccagccatttactgccagaggcccccccagacactctcacatgaagaggctgcgtcgc
caaaggtcagccataatgcctgaggtgacccacctggagctgctagtggtggtggcgcct
gacgtgcagctggtccacaggcaggacacagagagatacatacttaccaacctcaacatt
gcctcagagctgctgagggacatgacactgggagccaacatgagagtgcatctggtccgt
atgatcatcctctcagaaccagagccagagattaacatctccaccaacatctcctcgtct
ctgaggagtgtgtgtgagtgggccagaagggtcatcccctctaatgacacggaccccctg
catgctgaccttgtgttatacatcacaagatttgatctggagctgcccaatgggaacaag
caggtgaggggcgtggcccagctaggcggggcatgttctagccaatggagttgtataatc
acagaggacacaggctttgatctgggcatcaccatcgctcatgagataggccacagcttt
ggtataaaccatgatgggattggtaacacatgcagcagcagtggctttatgatggcctct
gatggaggctacaacagtgtggatctcacctggtcccagtgcagcagacagcagctgtac
acattcttcagtgaaggcaaggctgactgtgtgaaagacttgcctgttctggttggctct
ctgcaagactggaagccaggcctttactatggcgtggacgaccagtgccggatagcgttt
ggtagcaccgccagggcctgctccttcaccaaccctgacctgcctgtgtgccgtgttctc
tcctgccacatcaaacctgatgacaacagctcatgtaaacgtctgctggtgcctctgttg
gatgggacagagtgtgcacccaaccagtggtgcctgaagggccgctgtgtgtccccagac
cagctcagttcctcttcctctgcggtggtgcacgggtcctggtccagctggtcccagttc
tccccatgctcacggatatgtggcgggggcgtcacttcccggaccaggcaatgcaacaac
ccacgacctgcatttggtgggaatgactgcaagggcagggatacagaggcggaactttgt
caccagcagcagtgtgaaaggacccagctggccttcatggcagagcagtgcgcccagaca
gatctacagcccctgtacctgtcccccaacacggcctccctctacacctggatccccgct
gtaggctttgtcacaggggatgaacagtgcaggtacatgtgccagtgtaagggagagaac
ttcattgtgagccgtgggtctcagtttgtggatgggactcgttgtgaaccagacagtcca
gctccccttggtgccacgacagcttgtctaggagggatgtgccagctgtttggctgtgat
ggagtgttgaagtctgggaaggtggaggatgtgtgtggggtatgtggaggggatggctcc
tcttgcagtctcacctctcagtcttacagtggtggtcaggccagagagtacgtcacattc
ctgaccctgccagtaaacgccactcaggttcacattgtcaacagggcacctgtcttcact
cacctggcggtgttgattgggaatcagtatgttgtgtctgggagtggcggcattgcgtta
aacatcactcacccctctcctctggaggacggtcgtctggtttatcgtctgtacctgacc
cctgacctcctgcctctcatggaggagctgctgctacctggaactgttacagaggagaca
cacatacaggtctatcggaaatatggaaaagaatatggaccacaaaccagtccaaacatc
acctaccacttttatactcccattagtaataatgcttttataaaagagatacccaggggc
aagtggactgttgttacaacatcctgctctgtcacctgtggctctggcatacagaaatct
atgcatgtctgtatggatgaagacaccaaggagcatctggaggaggtctactgtgattca
gctccccttctcctgcttcagcagacaacctgtcacctcccagcctgtccccccagctgg
gagacgggagagtttgggccctgcagtgccttatgtggtggaggagagaaagtgcgccct
gtgagatgtgttcaaaggcaaggagcagatgtcctacaggtggccgtttctgaatgtcca
caacacccagccacacaatcagtggatacatgcaactttcaaccctgccctgcaaggtgg
aatgcgtcagaagccggggagtgttcagcggtgtgtgggcccggagcggccaaacgcgtt
gtgacatgtgtgcggtccgaaggtggtcatgatgttgaggtggaccatagcttgtgttca
gggctcttcaaaccacctgtcttagtgtcttgtgtgatcgatgtctgcccaattggctgg
gagtctaagggacaggatcaacctatacttaacaaatcccctggtttaaggtaccgctcc
aggtacctaacagtgtatgtttggagccctgtgataggccaatgctcaaagacctgcgga
aatggtaccctgcaggtgtggttttcatgtctggaccaccagaccaggctagcggtgcct
gaggtctactgtgatgcctccagcaaaccagagcctcacacagagtcctgcaacccttcc
ccttgccctcccatgtggcgctacaagcagggagtgtgcagtgtgtcgtgtggaggaggc
gtggcccatagggtgctatactgctcccaggagaccgagggagatgaggaggtggttgtg
aacaatacagagtgcagtaacatgaccaaacccatagcagtggtcacatgcaactccaac
agctgtccagccaggtggagagcgctgaggacgggggcctgttctacgtcttgtgatctg
gggttagccaggaggcatgtctcttgtgttgagtatatccatggggaggacagtgaggtg
tctgaggagagatgccatgcagccgttaaacctgctaccacggtaccctgtctggtgcag
gtgtgcaccttcagatgggacgttaaagactggaatcagtgttcagtgccatgtgggtat
gggatccagtctagagcagtgtcctgcatgggacccactaagcctgagcccctcagccca
ctgctctgcatgcacatgcccaagcccatcactatccggggctgccagatggacgactgc
agggtcttagagaagactagtcccctcacccacacacacaccaccaacgccccctcacta
gagaccagggacctgttacccagtccccagggcatggaagtcactcccatggatgaggag
ctgtctcctactctcagcctgacccagacacccccgactgcaacagaactgatcacccca
gccatgcccactgtgacacctaaaaccagtctgtgtgggcagcttctgctgggggagtca
ggcacagtggacttgagacatgagacaggtcgctgcatcctgtcaataggccggcccctg
gatgaggtcatccacatgaaagtagagtccagctccctaagctgcaagaaaagggagtat
gtggcgttctatgacaggctggtactggtcaggaagtgtgaccagcttgaggacactgaa
ctgacctccaggaccaacgtcctgctggtgcgccagcatctcttgtcccctggaaacgga
gtgctgctcacttacagcagtcagaagaacaacaagaagagtcaccaccaggactgtgat
gtccagctgtttgctcccagcggggtcattgagaatccaacgatgacctcagcgttgggc
agtcacacctgtcgagtcctcatcaacgcccctccctcagtgaagattaggatccgggct
ctgagcatgggccctgtggtcaacagcacagcagcccagtccaccttcattatgatacga
gatgtagacgtcttgaagaccaacgtgttcaagggccaacagctttttgactggcgatca
gctggaaacatggcagagatagaatttcatggcgagtacctgcaaagcaacgggagcttc
cgagctgaatactcattcgtggagccttga
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integrated database retrieval system
