KEGG   Salvelinus namaycush (lake trout): 120063203
Entry
120063203         CDS       T07522                                 
Name
(RefSeq) probable cytosolic iron-sulfur protein assembly protein ciao1-A
  KO
K24730  cytosolic iron-sulfur protein assembly protein CIAO1
Organism
snh  Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:snh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:snh03036]
    120063203
   03400 DNA repair and recombination proteins [BR:snh03400]
    120063203
Chromosome and associated proteins [BR:snh03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    120063203
DNA repair and recombination proteins [BR:snh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     120063203
SSDB
Motif
Pfam: WD40 WD40_Prp19 Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_TEP1_2nd Beta-prop_EML_2 Beta-prop_IFT140_1st Beta-prop_RIG_2nd ANAPC4_WD40 EIF3I WDR55 WD40_MABP1-WDR62_2nd Beta-prop_WDR35_TULP_N Beta-prop_WDR19_1st Beta-prop_IFT122_1st Beta-prop_WDR75_1st Beta-prop_WDR90_POC16_2nd Beta-prop_EIPR1 Beta-prop_EML eIF2A NBCH_WD40 WDR90_beta-prop_4th Beta-prop_TEP1_C Beta-prop_HPS5 B-prop_COPA_B_2nd Beta-prop_ELP1_1st Beta-prop_DCAF12 Beta-prop_SCAP Beta-prop_NUP159_NUP214 RMC1_N
Other DBs
NCBI-GeneID: 120063203
NCBI-ProteinID: XP_038869350
UniProt: A0A8U1F4E0
LinkDB
Position
Sna18:complement(19868621..19870747)
AA seq 329 aa
MKDTLALLQKFNAHPDSRCWYVAWNPKGTLLASCGGDRAIRIWGREGDSWECKTVLQDGH
QRAVRKVAWSPCGNYLASASFDATTCIWKKKNDDFECLTVLEGHENEVKCVAWAPSGNLL
ATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASCSYDNNVCVYKEE
DDDWECRAILEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGTDTAWKCVCTLS
GFHGRTVYDIAWCPLTGALATACGDDGVRVFKEDETADPDQPVFSLSAHVPKAHSQDVNC
IAWHPKEAGLLVSCSDNGEIAVWNYQSAV
NT seq 990 nt   +upstreamnt  +downstreamnt
atgaaggacactttggcccttctacagaaattcaacgcgcatccagattctcgctgttgg
tatgttgcatggaaccccaagggcacattgctggcctcgtgtggtggtgaccgggccatt
cggatatggggaagggaaggtgactcttgggaatgcaagacagtgctccaggatggacac
cagcgagctgtcagaaaggtggcatggtccccatgtggaaactacctggcctcagccagc
tttgatgccacaacctgcatctggaagaagaagaatgatgactttgagtgcttgactgtg
ttggaaggacatgagaatgaggtcaaatgtgtggcctgggccccatccggtaacctgctg
gccacatgtagtagagacaagagcgtctggatctgggaggtggatgaggaggatgagtat
gagtgtgtgagcgtggtgaactctcatacacaggatgtcaagcatgttgtctggcaccca
acacaggagctcctggcctcgtgtagctatgacaacaatgtgtgtgtctataaagaagag
gatgatgactgggagtgcagggcgatcttggagggtcacacctccactgtctggggtttg
acctttgacccaagtggccagagactggcctcctgcagtgatgaccgtactgtgaagatc
tggaaagaatgtcagcctggaggcacagacacggcttggaaatgtgtttgcaccctttca
gggtttcatggacggacagtgtatgatattgcatggtgtccgctgaccggtgccctggcg
actgcatgtggtgatgacggagtgcgtgtgtttaaggaggatgagacggctgacccagac
cagcctgttttctccctgtctgcccatgtacccaaggcccacagccaggatgtcaactgt
atcgcctggcaccccaaggaggctgggctccttgtctcctgcagtgacaatggggagata
gcagtctggaactaccagtctgcggtctga

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