Salvelinus namaycush (lake trout): 120063220
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Entry
120063220 CDS
T07522
Name
(RefSeq) long-chain-fatty-acid--CoA ligase 1-like
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh00061
Fatty acid biosynthesis
snh00071
Fatty acid degradation
snh01100
Metabolic pathways
snh01212
Fatty acid metabolism
snh03320
PPAR signaling pathway
snh04146
Peroxisome
snh04216
Ferroptosis
snh04920
Adipocytokine signaling pathway
Module
snh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
120063220
00071 Fatty acid degradation
120063220
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120063220
09143 Cell growth and death
04216 Ferroptosis
120063220
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
120063220
03320 PPAR signaling pathway
120063220
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
snh01004
]
120063220
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120063220
Enzymes [BR:
snh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
120063220
Lipid biosynthesis proteins [BR:
snh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
120063220
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of breast milk
120063220
Exosomal proteins of breast cancer cells
120063220
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
120063220
NCBI-ProteinID:
XP_038869375
UniProt:
A0A8U1F409
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All DBs
Position
Sna18:complement(21007964..21025788)
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AA seq
717 aa
AA seq
DB search
MHFQEWLQSLHSSGGVRGPVREDFWSLLPSLPSSSSFSLSSLSRSPSSLLGIGALASLTA
YWLVTRRRPMQPPCDLNAQSIAVQGEPNWRRSALLKDDALLEFYYDDTRTAYDMFQRGLR
VAGDGPCLGFRKPGEPYQWISYTEVAEQAQVLGSGLLGKGCQPNPEQFVGIFAQNRPEWI
ISELACYTFSMAVVPLYDTLGEEAMVHILNLAEISLVICDKEEKAESLLGNKEKGATPTL
SCLVLFNDCSDAIVERGKNCGVEILELTQLMVLGRQNLKDPMPPKPQDLAVVCFTSGTTG
KPKGAMITHGNIASNSSSVIKILEGSFFIRQEDVSISYLPLAHMFERMIQVSMFCHGARV
GFYQGDISLLMDDIKTLKPTFFPVVPRLLNRIYDKILGSVTSPLRRAVLHYAVRRKQAEL
SSGVVRNNSLWDRLVFNRIQDNLGGNLRFILTASAPISPTVLSFLRATLGCLIFEGYGQT
ECTAGCTFSMPGDWSAGHVGAPLPCAMVKLVDIPDMNYYAKNGEGEICIRGHSVFRGYLK
DEEKTAEALDSDGWLHSGDVGQWLLNGTLRIIDRKKHIFKLSQGEYIAPERIENIYMRCV
PVLQVFVHGDSLKSHLIGIVVPDPEVFIDWVKERGIIGSYKELCQHPDVKKAVLEDMTAM
GKEAGLKSFEQLKDLHLHPEMFSVSNGLLTPTLKSRRVDIRRVFQEQITNMYSTTAI
NT seq
2154 nt
NT seq
+upstream
nt +downstream
nt
atgcattttcaggagtggttacagtcccttcactccagtgggggggttcggggacctgtg
agggaggacttctggagccttctcccctctctcccttcgtcatcgtctttctccctttcc
tccctctctcggtccccctcctctctgctgggtataggggctctggcctccctcactgca
tactggctggtgacccgccgtcggcccatgcagcccccctgtgatctcaatgcccagtct
atcgctgtacagggagagcccaattggaggcgttcagctttgctcaaggacgatgccctg
ttggagttctactatgatgacaccaggacagcctatgacatgttccagagaggtctgagg
gtggcaggggacggcccatgccttggcttcaggaaacctggggagccttaccagtggatc
tcctacactgaggtggctgaacaggcacaggtgctgggctctgggcttttgggcaaaggc
tgccaaccaaaccctgagcagtttgttggaatatttgcccagaacagaccagagtggata
atttcagagctggcctgctacactttctctatggcagtggtgcccctgtatgacacactt
ggagaggaggccatggtgcatatcctcaacctggcggagatctcactggtgatctgtgac
aaggaggagaaggcagagtcccttctggggaataaggagaaaggtgcaacacccactctc
tcctgtctggtgctctttaatgactgcagtgatgccatagtggagaggggcaagaactgt
ggagtggagatcctagaactcacacagctcatggtacttggacgacagaacctcaaagat
cctatgccaccgaaaccccaggacctagcagtcgtgtgcttcaccagtggaaccacagga
aagccaaagggagccatgatcacccacggcaacatcgcctccaactcctcctctgttatt
aagatcctggaggggtcattttttattcggcaagaagacgtgtcaatctcttacttgcct
cttgcccacatgtttgagaggatgattcaggtgtccatgttctgtcatggggccagggta
ggattctaccagggggatatctccctgctcatggacgatattaagactctgaaacccact
ttcttcccagtggtgcctcgcctactcaaccgtatctacgacaagatcttaggctctgtg
acgtccccattgcgccgggcagtgctgcactatgcagtgagaaggaagcaggctgagctc
agcagtggggttgtacgtaacaacagtctgtgggacaggctggtattcaacaggattcag
gataatttaggaggtaatctgaggttcatcctgactgcctcggcccccatctcccccacc
gtgctctccttcctcagggccaccctcggctgtctgatctttgagggttacgggcagact
gaatgcacagcaggctgcaccttctccatgccaggagactggagtgcaggccatgttggc
gctcccctgccctgtgcaatggtgaagttggttgacatccctgatatgaactattatgcc
aagaatggagaaggagagatctgtatccgtggccacagtgtgttccggggttacctgaag
gatgaggagaaaacagcagaggccctggatagtgatggctggctgcacagtggagatgtg
ggccagtggttactgaacgggacacttcgcatcatcgacaggaagaagcacatcttcaag
ctgtcccagggagagtacattgcccctgaaaggattgagaacatctacatgcgttgtgtc
cctgtgctacaggtctttgtgcacggtgacagcttaaagtctcacctgattggtattgtt
gtgccagacccagaagtgtttattgattgggttaaggagaggggaatcattggatcctac
aaggagctctgccagcatccagatgtgaagaaagcagtgttagaagacatgacagccatg
gggaaggaagctgggctgaagtcttttgagcagctgaaggacctgcacctgcatccagag
atgttcagtgttagcaacggccttctcacccccactctgaagagcagacgagtggacatc
cgcagggtcttccaggaacagatcacaaacatgtacagcacaacagccatctag
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