Salvelinus namaycush (lake trout): 120063222
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Entry
120063222 CDS
T07522
Name
(RefSeq) dynamin-1-like protein
KO
K17065
dynamin 1-like protein [EC:
3.6.5.5
]
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04217
Necroptosis
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09140 Cellular Processes
09143 Cell growth and death
04217 Necroptosis
120063222
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120063222
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
snh04131
]
120063222
03029 Mitochondrial biogenesis [BR:
snh03029
]
120063222
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
snh04147
]
120063222
Enzymes [BR:
snh01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.5 dynamin GTPase
120063222
Membrane trafficking [BR:
snh04131
]
Endocytosis
Clathrin-mediated endocytosis
Dynamin
120063222
Lipid raft mediated endocytosis
Caveolin-mediated endocytosis
120063222
RhoA-dependent endocytosis
120063222
Mitochondrial biogenesis [BR:
snh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Fission and Fusion factors
120063222
Retention of mitochondria
120063222
Exosome [BR:
snh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120063222
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dynamin_M
Dynamin_N
GED
MMR_HSR1
T3SS_needle_E
AAA_16
Rrn7_cyclin_N
Motif
Other DBs
NCBI-GeneID:
120063222
NCBI-ProteinID:
XP_038869377
UniProt:
A0A8U1F454
LinkDB
All DBs
Position
Sna18:21074825..21088616
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AA seq
659 aa
AA seq
DB search
METLIPIINRLQEVFLTVGAEIIQLPQIVVVGSQSSGKSSVLESLVGRDFLPRGSGIVTR
RPLVLQLVNVPPLAERRLQENGIKADEWGTFLHSKNQIFTDFLEIRKEIEEETERSSGGN
KGISPEPIYLKIFSPYVLNLTLVDLPGITKVPVGDQPEDIEAQVQEMILSFISNPNSLIL
SVSPANSDLATSDALKLAREVDPDGRRTLLVISKLDLMDAGTDALEVLLGRVIPVRLGIV
GVVNRSQHDINTQKSIEDTARDEQAFLQRHYPSLASRCGSRYLARTLSRLLMHHIRDCLP
ELKRRVTVLSAQYQSRLSSYGQPVEDHSATLLQIVTKFASDYCNTIEGTATHIQTSELCG
GARICYIFHETFGRTLQSIDPLGGLTELDILTAIRNATGPRPALFVPEISFELLVKRQIK
RLEEPSLRCVELVHEELQRIIQHCSSYSTQELLRFPKLHDSIVEVVTSLLRKRLPITNDM
VHNLVQIELAYINTKHPDFTDAAQVSASVNSQQGLQDGDKCWMNEKVAEEKAPVAGFSSP
VKGQAINLLDTAVPVSRKLSSREQRDCEVIQRLIKCYFLIVRKSIQDSVPKTVMHFLVNF
VKERLQSELVGQLYKQNLLQGLLIESQDTAQQRTEVAQMLEALQKASNIISEIRETHLW
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atggagactctaattcccatcatcaatcggctccaggaagtcttcctgacagtgggggca
gagatcatccagctgcctcagatagtggtggttggctcacagagcagcggcaagagttct
gtgttggagagcttggttggaagggattttctgcctcggggatcaggcatagtcacacgg
cgacccctagtgttgcagctggtgaatgtgcctccattggcagagaggagactgcaagaa
aatgggatcaaggctgatgaatggggcacgttccttcatagcaagaaccagattttcaca
gatttcttggagattcgcaaggagattgaagaagagactgagcgtagctcaggaggcaac
aagggaatcagccctgagcccatctatttgaagattttctctccttatgtcctcaatctc
acactggttgatttgccaggaataaccaaggttccggttggagatcagccagaggacata
gaagctcaagtccaagagatgatcctatccttcatctccaaccccaactcccttatcctc
tcagtgtctcctgccaactctgacttggccacctctgatgccctcaaactggcccgcgag
gtcgacccggatggccgcagaacactgctggtgatcagtaagctggacctgatggacgca
gggacagatgctctggaggtcttgctgggtcgggtcattccagtgcggctcggaattgtg
ggagtggtcaacaggagccagcatgacatcaacacccagaagagcatagaggacacggca
cgggacgagcaggccttcctccagcgccactacccgtctctggcctcccgctgcggctcc
cgctacctggctcgcaccctgagccgcctgctcatgcaccacatcagggactgcttgccg
gagctgaagaggcgtgtgacggtgttgagtgcccagtaccagtcccggctcagcagctac
ggccagcctgtagaggaccacagcgccaccctgctacagatcgtcaccaagttcgccagc
gactactgcaacaccatcgagggcaccgccacgcacatccagacatctgagctctgtggg
ggggctcggatctgttacatattccatgagacctttggccgcactcttcagtctattgac
cccctggggggcttgacggagctcgacatcctcactgcaatccgcaatgctacgggtccg
cggccggccctctttgtacctgagatctcctttgagctgctggtgaagaggcagatcaag
cgtctggaggagcccagtctgcgctgtgtggagctggtccacgaggagctgcagagaatc
atccagcattgctcctcctacagcacgcaggagctccttcggtttcccaagctgcacgac
tccattgtggaggtggtgactagtttactcaggaagcgcttgcccattactaatgacatg
gtccacaacttggttcaaattgagcttgcttacatcaacacaaagcacccagactttacc
gatgctgctcaggtctcagcatctgtcaacagtcaacagggcctgcaggatggagataaa
tgctggatgaatgagaaggtggctgaggagaaggcaccagtggcaggtttcagcagccct
gttaagggccaggccatcaacctcctggacacagcggtgccggtgtcccgaaagctgagt
tcccgggagcaaagagactgtgaggtcattcaacgcctcatcaaatgctacttcctcatc
gtccgcaagagcattcaggacagtgtgcccaagacggtgatgcacttcctggtgaacttt
gtgaaggagcgtctgcagagtgagctggtgggccagctgtacaaacagaacctgctgcag
gggctgctcattgagtcccaagacacagcacaacagaggacagaggtggcccagatgctg
gaggctctccaaaaagccagcaacatcatctcagagatccgggagacacacctgtggtag
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