Salvelinus namaycush (lake trout): 120063281
Help
Entry
120063281 CDS
T07522
Name
(RefSeq) squamous cell carcinoma antigen recognized by T-cells 3-like isoform X1
KO
K22611
squamous cell carcinoma antigen recognized by T-cells 3
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
snh03041
]
120063281
03036 Chromosome and associated proteins [BR:
snh03036
]
120063281
Spliceosome [BR:
snh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
120063281
Chromosome and associated proteins [BR:
snh03036
]
Eukaryotic type
Histone modification proteins
Other histone modification proteins
120063281
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
HAT_PRP39_N
LSM_int_assoc
Suf
HAT_PRP39_C
HAT_Syf1_CNRKL1_N
RRM_occluded
HAT_Syf1_CNRKL1_C
Lsm_interact
HAT_Syf1_M
Motif
Other DBs
NCBI-GeneID:
120063281
NCBI-ProteinID:
XP_038869489
UniProt:
A0A8U1H2M4
LinkDB
All DBs
Position
Sna18:complement(27468661..27485564)
Genome browser
AA seq
957 aa
AA seq
DB search
MAATGNAEESQLQEMEEEAGMEREMDSDEEEGMGIENSDDEEDDSSEDDKENEAEIQRLE
EQLSINAFDYNCHVDLIKLLRQEGELPPLRKARQKMSELFPLTEEIWLDWLKDEIHLTEE
EQNREKVYELFEMAVKDYICPEIWLEYAQYSIGGMGLPGGMEKVRYIFERALTAVGLHMT
KGATVWEAYREFENVILATVQPPPGSVPTSEQQALLNAQLERIHTLFRRQLAIPLMDMEG
TYAEYEEWSDQGVSDTVSQKFKRALQQMEKSKPYEETLMAAEPPKQAEYQTYIDYEQKEG
DPARIQIIFERALAENCLVPDMWAKYTKYLDRQLKIKDLVLSSHDRAVRNCPWTMGLWKN
YLLALERHGADHQTISGVFEKALNAGFIQATDYVNIWEAYLDYLRRRVDFSKGESTLTLE
SSRELEELRAAFTRSLDYMKQDVEERFSESGDPSCTIMQVWAKIEALHCKNIQKARELWD
SIMTKGNAKFANMWLEYYNLERSYGDALHCRKALHRAVQCTSDYPEHVCEVLLTFERVEG
SLEDWDAAVQKTETRLNRVNEQRAKVAEKEAHLVRQEEEKTEQRRRAKADKKNQKKGQKG
SRPGEKRKAEDEDNEDEWGEESEQPPKRHRGEGNQGSFRGGGAEEFMETESGLFGRRAPP
CRRQEPPGAKRGQQIAPATVRKTQEDNPEQRKDDCSVFISNLAFSMEDPEKRLKELFESC
GPVQSVRPVYAAKGFRGYCYVQFEGKTSVPEALTMDRREVDGRPMFVSLCVDKNKNPDFK
VFKYNTNLEKHKIFISGLPFSCTKEQLEELCNDQGTIKDIRLVTNRSGKPKGLAYVEFED
EAQASQAVVKLDGTVLQEHTLSVAISNPPRRTAADKPDFSRPMGAMMPRAMVYGSRGKGR
TQLSLIPRSIHRQTGSESKAENGTAPKPTGGASGDAGFEAQAKPMSNSDFAKMLLRK
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaacggggaacgcagaagagtcgcagttgcaagagatggaggaagaggcaggg
atggaaagagaaatggattcagatgaagaggagggtatgggaatcgaaaattccgacgat
gaagaagacgattcgtcagaagatgataaagagaatgaagccgaaattcagcgtttggag
gagcagctgtccatcaatgcttttgactacaactgtcatgtggacctcataaaactcctg
aggcaggagggggaactgcctccattgcgtaaggcaaggcagaagatgagtgagctcttc
ccactgactgaagagatatggctggactggctcaaggatgagatccacctaaccgaggag
gagcagaaccgggagaaagtctacgagctctttgagatggctgtgaaagattatatctgc
cctgaaatctggctggagtatgcccagtactctatcgggggcatgggactgcctggtggg
atggagaaggtgaggtatatcttcgagagagccctgacagccgtggggctgcacatgacc
aagggggcgactgtgtgggaggcctacagggagtttgagaacgtcatactggcaactgtt
cagcctccccctggcagcgtccccaccagcgagcagcaggcgcttctgaacgctcagctc
gaacgcatccacactctgttccgccgccagctggccatccccttaatggacatggaagga
acatatgcagagtatgaggagtggtctgaccagggggtgtctgatacagtctcccagaag
ttcaagagggccctgcaacagatggagaagagcaagccttatgaggagactttgatggca
gccgagccacccaagcaagcagaatatcagacctacattgactatgagcaaaaggagggt
gacccggcacggatccagatcatctttgagcgggcactggcagagaactgcttggtacca
gacatgtgggccaagtacaccaagtacctggatcgtcaactaaaaatcaaagacctggtc
ctgtcctctcacgaccgtgcggtcaggaactgcccctggaccatgggcctgtggaagaac
tacctgcttgccctggagaggcatggggccgaccaccaaactatatcaggtgtttttgaa
aaggccctgaatgccggattcatacaagctacagattatgttaatatctgggaagcgtac
ctcgattacctgaggaggcgtgtcgatttcagcaaaggtgaaagcaccttaacattggag
tcaagcagagagctggaggagctgcgggcagccttcacccgttctctagactatatgaaa
caggatgttgaagagagatttagtgaaagtggagacccttcctgtaccatcatgcaggtc
tgggcaaagatagaggccctgcattgtaagaacattcagaaagctagagaactgtgggac
agcatcatgacaaaagggaatgccaaattcgccaacatgtggctggagtactataacctg
gagaggtcgtacggagatgctctccattgcaggaaagccctccacagggccgtccagtgt
acctccgactaccctgagcatgtgtgtgaggtcctgctcacctttgagagggttgagggg
tctctggaggactgggatgcagcggtgcagaagactgagacaaggctgaacagagtaaac
gagcagagggccaaggtggcagagaaagaggcccatctggtccgacaggaggaggagaag
actgaacagcggcggagggccaaggcagacaagaagaaccaaaagaagggacagaaaggc
agcaggcctggggagaagaggaaggcagaggatgaggataacgaggatgagtggggggag
gaatcggagcaacctccaaagaggcaccgaggggagggcaaccagggcagcttcagggga
ggaggtgctgaggagttcatggagacagagagtggactgtttggaaggagagctccccct
tgccgcagacaggaaccccctggtgctaagaggggccagcagatagcaccagccaccgta
cggaagacccaggaagataaccccgaacaacgcaaggatgactgcagtgtgtttatcagc
aacctggccttcagcatggaggatccagagaagagactgaaggagttgtttgagtcctgt
ggtcctgtccagtcagtgcgccccgtctatgctgccaagggcttcagagggtactgctac
gtacagtttgagggcaagacgtccgtgcccgaggccctgacgatggaccggcgtgaggta
gacggcaggccaatgttcgtatcgctctgtgtggataaaaacaagaaccctgattttaag
gtatttaagtacaacacaaacctggagaaacacaagatctttatctcgggcctgcccttt
tcctgcaccaaggagcagctggaggagctgtgcaatgatcaaggcaccatcaaagacatc
cgcctggtcaccaaccgctcaggcaaacccaagggtctggcgtacgtggagtttgaagat
gaggctcaggcctcccaggccgtggtgaagttggatggcacggtactacaggaacacaca
ctctctgttgccattagcaacccacctcgcagaactgcagccgacaagcctgacttcagc
aggcccatgggagccatgatgccacgggctatggtctatggatcgaggggaaaagggaga
acccagctctcactaatccctcgttccatacatcggcagactggatcagaaagtaaagca
gaaaatgggactgcacctaaacccacagggggtgcatccggagacgctgggtttgaagca
caggccaagcccatgtccaattcagactttgccaaaatgcttctcagaaagtga
DBGET
integrated database retrieval system
