Salvelinus namaycush (lake trout): 120063506
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Entry
120063506 CDS
T07522
Name
(RefSeq) ras and EF-hand domain-containing protein homolog
KO
K17199
Ras and EF-hand domain-containing protein
Organism
snh
Salvelinus namaycush (lake trout)
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
snh04031
]
120063506
04990 Domain-containing proteins not elsewhere classified [BR:
snh04990
]
120063506
GTP-binding proteins [BR:
snh04031
]
Small (monomeric) G-proteins
Rab Family
Rab45
120063506
Domain-containing proteins not elsewhere classified [BR:
snh04990
]
EF-hand domain-containing proteins
Other EF-hand domain-containing proteins
120063506
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
MMR_HSR1
EF-hand_8
GTP_EFTU
ATG16
ACBP4_C
AAA_25
EF-hand_10
AAA_24
DUF3613
DUF1848
Motif
Other DBs
NCBI-GeneID:
120063506
NCBI-ProteinID:
XP_038869810
UniProt:
A0A8U1F4S7
LinkDB
All DBs
Position
Sna18:complement(3748029..3778179)
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AA seq
725 aa
AA seq
DB search
MSLPAMGTDRESLCSLFHACDVDNSGRIEKDEFVQICSELLVPPTEREHIFSKLDTDRDG
TINLAEFISGFHRISEQVYCGDMESKSWGVSSQAWEDFQTRLGDHARFIPRNEQAATLYQ
NISMTEPRMVPQYERVIMSFTREIKQHNAEMENLALAVKRAHDQAAMQLSEMEEEMDQRI
HAAENNTQQQEANRTEAALSELKRHYESEVCELQHKLQKMQLIEDQYKNINMKDESSTLK
RKINELTLENQRLKQELMQSQTNIAFLQSELASLKSDLTDHSINSERDEAMMREFSDERE
NLERQIEILQTANRKLHDSNDGLRSSLENTLSKSNKVSSASPASTISRRSKSICYSSPYR
FYQAGVDGVDVDEDLLGLCGGEGGRSSLGCRRTSLDTLALALCDPAMQRKRSCEVDSLPE
SCLDSGMSTLRGSNNGYDSEQEVKGHEEEQRMAGNTDSLAGDHSDNDVAEMRDEMVFGSD
SDSVLDWKPLESVSRTSSGASTRKALSAITNEKESADLGYMTSEKAYRVVLAGDAAVGKS
SFLLRLCKNEFRGNSSATLGVDFQMKTLVVDGEPTLLQLWDTAGQERFRSIAKSYFRRAD
GVLLLYDVTCEQSFLNVREWVDMIEDVSQDDIPIMLVGNKCDLREQALQDSVTCVPTSFG
EKLAMTYNALFCETSAKDGSNVIEAVLHLAREMTKQVHGDENQESVTNLYRSPNKKMPTV
TCCTG
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgtcgttaccagccatgggtacggaccgggagagtctctgctcgctctttcacgcttgt
gatgtggataattctggacggattgaaaaagacgagtttgtccaaatctgctcagagctc
cttgtcccgccgacggagagagagcacatattctctaaactggacaccgacagagacggg
acaatcaatctagcggagttcattagcggcttccaccggatctctgagcaagtgtactgc
ggggatatggagagcaagagctggggagtctcctctcaggcctgggaagatttccagacc
cgactaggggaccatgcccggtttatacccaggaatgagcaggcagccacgctataccag
aacatcagtatgacagagcccaggatggtgcctcagtatgagagagtcattatgagcttc
accagagagatcaagcagcacaatgctgagatggagaacctggccctggctgtgaaacga
gcccatgaccaagccgccatgcagctcagtgagatggaggaggagatggatcaacgcatc
catgcagctgagaacaacacacagcaacaggaggccaataggactgaggcagctctgagt
gagctgaagagacactatgagtctgaggtgtgtgaactgcagcacaagctccagaagatg
cagctgattgaagaccagtacaagaacatcaacatgaaagacgagtcttcaaccctgaag
agaaagatcaacgaactgactctggaaaaccagcggttgaagcaggagttgatgcagtct
caaactaacatagccttccttcagagtgaactggcctctctgaagagtgatctgacagac
cacagcatcaactctgagcgggatgaggcgatgatgagagagttctctgatgagagggag
aacctggagcgacagatagagatcctacaaacagccaacaggaagctccatgacagtaac
gacgggctgcgcagttccctggagaacaccctcagcaagagcaataaggtgagcagtgct
tccccagccagcaccattagcaggaggagcaagagtatctgttactcatcaccatacagg
ttctaccaggcgggtgtggatggtgtggatgtggacgaagacctgctgggcctttgtgga
ggtgaaggtggtaggagttctctggggtgtcggcggaccagtctggacaccctagccctg
gctctgtgtgacccggccatgcagcgcaaacgcagctgtgaggtagacagcctgcccgag
agctgcctagacagcggcatgtccacgctgcgtggctccaacaacggatatgactctgag
caggaggtgaaagggcacgaggaggaacagaggatggccgggaacacagacagcctggcg
ggggaccactcagacaacgacgttgcagagatgcgggatgagatggtgtttggatcagac
agtgattctgtcctggactggaaacctttggagtcagtcagccggaccagctctggagcg
tccacacgcaaggccctctctgccatcaccaatgagaaggagtcagctgacctgggctat
atgacatcagagaaggcctacagggtggtgttggctggcgacgcagcggtgggcaagtcc
agcttcctgctccgcctctgcaagaacgagttccgaggaaacagcagcgctaccctgggg
gtggactttcagatgaagactctagtagtggatggagagcccacccttctacagttgtgg
gacacagcaggccaggagaggttccgcagcattgcgaagtcctacttcagacgagccgac
ggggtcctcctgctgtatgatgtcacctgtgaacagagctttctcaacgtgagagaatgg
gtggacatgattgaggacgtgtcccaggatgacattcccatcatgctagttggaaataag
tgtgacctgagggagcaagcgctacaggacagtgtcacctgtgtccccaccagcttcgga
gagaagctggccatgacatataacgccctcttctgtgagactagtgctaaagacggatct
aatgtcatagaggccgtgctgcatctggccagagagatgaccaagcaggttcatggggat
gagaaccaggagtctgtgactaacctctacagaagtcccaacaagaagatgcccactgtc
acctgctgcacaggataa
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