Salvelinus namaycush (lake trout): 120063720
Help
Entry
120063720 CDS
T07522
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
snh
Salvelinus namaycush (lake trout)
Pathway
snh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
snh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
120063720
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
URGCP_GTPase
RuBisCO_large_N
Motif
Other DBs
NCBI-GeneID:
120063720
NCBI-ProteinID:
XP_038869943
UniProt:
A0A8U1H3B7
LinkDB
All DBs
Position
19:5819550..5843509
Genome browser
AA seq
625 aa
AA seq
DB search
MDSPMCLVKNTDGELCVEPEAIDYLMGLKQKVVVVAVVGLYRTGKSYLMNKLAQRKRGFA
LGATIQSKTKGIWMWCVPHPEKTDHTLVLLDTEGLGDVEKGDSKNDAWIFSLAILLSSTL
VYNSRGTINNDAVEKLQYVNELTEMIKVKSSTDNEEEGEGTQFMQFFPNFVWTVRDFTLQ
LEINDREITPDQYLENSLQLKKGTGKKINDYNLPRECIRNFFPSRKCFVFPSPTTPDNMK
RLDSMDEAELSESFREVADTFCRFIFQESRTKTVIGGHTLTGEMLGHLVTTYVDTIAKGN
VPCLENAVLAMAKIENQAAVDEGLAVYQKGMEDVKVLFPVDINQLSENHLRSETQATQAF
MKRSFKDENGEFLKALVGAISNHSADLFKQNKDASEKKCKALLENLSAPMDQEMKEGRYA
TPGGYELYCNHHDNIVAQYRAEPNKGVRAEEVLEQFLKGKSAESNSILQADKKLTENEKK
IQAEKKKTAELEQEKAASKEQQAEMERKIENMGRGQEKYLKEMEEKMEKERKQQQQEFNR
TLDHRMQEQKDLLEKGHKEKAELMRQEIEEIKKKNQLERDANTQNQKALLNDCKRQAEKH
KRKMHALMGKRNNRSHVCEPLCTLL
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atggactccccaatgtgcctcgttaaaaacaccgatggagagctttgcgtagaaccagag
gccatcgactacctgatgggactgaaacagaaagtcgtagttgtggcggtggttgggctg
tatcgcaccggaaagtcctacctcatgaacaagctggctcagaggaaaagaggttttgcc
cttggagccaccatccagtccaagactaagggcatctggatgtggtgtgtccctcatcct
gaaaaaacagaccacaccctggtgctgctggatacagagggactgggggacgtggagaag
ggggattctaagaatgatgcctggatcttctccctggccattctgttaagcagtactctg
gtctacaacagtcgagggaccatcaacaatgatgctgtggagaagcttcaatatgtgaac
gagctgacagagatgatcaaggtgaagtcttccactgacaatgaggaggaaggagagggc
acccagtttatgcagttctttcctaattttgtgtggactgtcagagatttcactctacag
ctggagatcaacgacagagaaatcactccagaccagtatctggagaattccctgcaactc
aagaaaggtactggtaaaaagatcaatgactacaacctcccgcgagagtgcatccggaac
ttcttcccctcacgcaagtgttttgtgttcccctcccctacaactcctgacaacatgaaa
cgactggactccatggacgaggctgagctttctgaaagcttcagagaggtggcagatact
ttctgccgcttcattttccaggagagccgtacgaagactgttatagggggacacacattg
actggagagatgctggggcacctggtcaccacctatgtggataccatagccaaaggcaat
gtgccctgtctggagaatgctgtgttggccatggctaaaattgagaaccaggctgctgtg
gatgagggcctggcggtgtaccagaagggaatggaggatgtgaaggtcttattcccggtg
gacatcaatcagctgtcagagaaccaccttcgctcagagactcaggccacacaggcgttc
atgaagcgatccttcaaagacgaaaatggggagttcttgaaagctcttgtgggggccatt
agcaaccactccgccgaccttttcaaacaaaacaaggatgcctcagagaagaagtgcaag
gcccttctggagaatctgtctgctccgatggatcaggagatgaaggaggggaggtacgcc
acaccaggaggctatgagctttactgcaatcaccatgacaacatagtggcacagtaccgg
gccgagcccaacaaaggagtcagggctgaggaggttctggagcagttcctgaagggaaag
agtgcagagtccaactccatcctgcaagctgacaaaaaactgactgaaaatgagaaaaaa
atccaagctgagaagaagaaaacagctgagctggagcaggagaaagcagcatccaaggag
caacaggcagagatggagcgcaaaattgagaacatgggcaggggccaggagaagtacttg
aaagagatggaagagaagatggagaaggagaggaagcaacagcagcaggagttcaacagg
accctggaccacaggatgcaggagcagaaagatctcctggagaagggccataaggagaag
gctgagctgatgaggcaagagatcgaggagataaagaagaagaatcaattggaaagggac
gccaatacccagaatcagaaggctctgctgaatgactgcaagcggcaggctgagaaacat
aaaagaaagatgcatgcgttaatggggaagcgcaacaatagatcacatgtttgtgaacca
ctctgtacactcttgtga
DBGET
integrated database retrieval system